Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0136 ATGGAGTACCTCTACCTCTCTTGCAGAGCCCAATCCGCAGTTTCAACCTCCGATTCGGTGTCTTCTTCCAAACCCACCAAAGACAAAGATAAAGACAAAACCAGCAGCAGCATCAAGATCCAAGAGTTTCACTACAGTGACCTCGAAGCTGCCACCAATGGCTTCTCCGACCGCAAGCTCCTCGGCAAAGGGAGCCACGGCTATGTCTACAAGGCGGTGGTTCACGGCCGTCCCGTCGCGGTCAAGCGTCCGTCGCGCTCGCACCATCACGGGGTGGTTCCTCGCCCTGTGTCTTCCTCCGCGCCGCTGGAGATCACCAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATCCAGAGCCCCAGGTTGGTGAATTTGGTGGGTTTCACGAACGATTCAAGGGACAGGCTTTTGGTGGTGGAGTTCATGAGCAATGGCACCCTTTACGATGTTCTTCATTCCTCTCCCAGGACTCCCAATTGGGGTAGGAGGATTCGTTTGGTTCTGCAAACTGCAAAAGCCATTGACACTCTTCACTCCTCCACCCCTCCTGTGATTCACCGTGACATAAAGTCTGCCAACGTTCTCATCGACCGCAGCTACAATGCCAGATTGGGTGATTTTGGTTTGGCTTTGAGAGGCCATGTCGATGACTACAGACTCAGGTCCACTCCCCCTGCAGGCACCATGGGCTATCTTGACCCTTGTTATGTCACCCCTGATAATTTGAGCACCAAAACTGATGTTTTCAGCTTTGGGATTTTGCTGTTGGAGATTATAAGCGGAAGGAAAGCCATTGATATCACCTATTCACCACCTTCCATTGTGGATTGGGCTATTCCTCTCATCAAGAAAGGGAAGTTGTTGGGTGTTTATGATCCCAGAATTGCACCTCCCAAGGATCCTGTTGTGAGGAAGCAGTTGGCTGTGATTGCTGCCAAGTGTGTGAGGTCTTGCAGGGAGAGGAGACCTTCCATGAAGGAGGTTGTTACTTGGCTCTGTGGGCTGTGTAAGCTGGTGCCTCTTCATTCGTGGAATGGTTTCAACAACCCTTGCATGATGGTTGAGACTGTGGGGCGCCCTGTTGAAGCAAGAAATGGTCAATTCAGTTCTAGGCTTGTGGAGGAGGGAAATTTTGATGCTTTGGATGCAAGGTTGTCCAAATCTGCAATGAGGTATTCCCGGAGGGTGTATTCTGATTTGGGGTTCAGCAGCAACTTGATGGACTTGATGGCTACCACTGAGGAGCCTGAATTTCTGAGAGATGCTGATGGGGTGGAGCATGGTTCTAAATCTGCTGAACAAGTTTCTAGCTCCAGGTTTGGCAGTGGAAGATATTCCATAAGAGGGAGGAACCTGTACCGGCCATGTGGCAGTGACAAGGATGCGTTTGGCTTGAGTAAAGGCCAGATTGTTGTAGGTCAGAGGGAGACCACTTCAACACATGAAGGTGTTTCTGGTTCAAATTCGAAGAATTTGAACTCTCTGGCTGTTGCTGAGGTTGTCTAG 1512 0.5033 MEYLYLSCRAQSAVSTSDSVSSSKPTKDKDKDKTSSSIKIQEFHYSDLEAATNGFSDRKLLGKGSHGYVYKAVVHGRPVAVKRPSRSHHHGVVPRPVSSSAPLEITNEVDNEIDILSKIQSPRLVNLVGFTNDSRDRLLVVEFMSNGTLYDVLHSSPRTPNWGRRIRLVLQTAKAIDTLHSSTPPVIHRDIKSANVLIDRSYNARLGDFGLALRGHVDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEIISGRKAIDITYSPPSIVDWAIPLIKKGKLLGVYDPRIAPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEVVTWLCGLCKLVPLHSWNGFNNPCMMVETVGRPVEARNGQFSSRLVEEGNFDALDARLSKSAMRYSRRVYSDLGFSSNLMDLMATTEEPEFLRDADGVEHGSKSAEQVSSSRFGSGRYSIRGRNLYRPCGSDKDAFGLSKGQIVVGQRETTSTHEGVSGSNSKNLNSLAVAEVV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0136 503 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Pvu11g0136 503 ProSiteProfiles Protein kinase domain profile. 55 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0136 503 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN 5 482 - -
Pvu11g0136 503 SMART serkin_6 55 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0136 503 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Pvu11g0136 503 PANTHER OS01G0750732 PROTEIN 5 482 - -
Pvu11g0136 503 MobiDBLite consensus disorder prediction 16 36 - -
Pvu11g0136 503 Pfam Protein kinase domain 56 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0136 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Pvu11g0136 503 Gene3D Phosphorylase Kinase; domain 1 25 143 - -
Pvu11g0136 503 SUPERFAMILY Protein kinase-like (PK-like) 34 334 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0136 Pvu-Chr11 1010342 1011853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0136 4 334 Receptor kinase-like Gene Family AT3G59420 41.159 5.47e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu11g0136 Pkinase 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0136 - - gmx:100819674 838.18