Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0132 ATGAAGAGATTGAGGTCGAGCGATGATCTTCACTCGTACGGCGGGGACAAGAATAACAATGGTTGCAAGGATTCCGGTAATCTGAACCGTTCGTTTTCGTCGGCTCAGCGGAGTTTCTATTACAAGCAAGATAATGCGCGCAAGGGTTTGGTGTCGTCTTCGTCGTCGCGGTACGAGAGGGATCGGGCGGTTGAGGAGGATCGGGAGGGTTCTAGGGTGGTTCGGAAGCGATCTGAGCACGATTTCGAGGGATTTGATAGGAGGAAAGGGTTCGATCGGTACAGAGAAAATGATCGGAGTTTGATGCACCGGTCGGAGAGTTTCTGCAGCGGTGGGTCGCGGAGGGATCAGTTTCCGAAGGGTTTTCGGTCGGAGAGGGATAGGTCGCGGAGGGAGGGGAGTGTGTCGTCTTGGCGGAGAGGGTTGAAGGATTTGGATGAAAGGGAGAGGGTGGTGCGTTCGCCCAAGGGTTTGAGGGATGTGAAGTCTCCGTCTTGGTCCAAGGATTCTGTTTCGGAAAGCGAGCAATCTAAGAAGAGATCTTCTTCTCCCAGACCCTTCAGAGAGGGTAACTCCAACAAGTCTAAGTCTAAGTCTCCCACTTGGTCTAAGGATTCTGTTTCGGAGAGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAAGTTGAAGAGGAGTTGTTGCAGCAGGTTCAGAGTGGGAGTAGTAGTGAGATGGAAGAAGGGGAGCTTGAACCTGAACCCCAAACGGAAATGATTGCTCCTGCGAGTGAAGACTTGACCCCCTCTGTTGCTTTGGAGGCTGATGAGAAGCAAGTTCAGAAGAATGAATGCCACCCCGATGATGATGACACTGATGCTATCATGCATGAGAATCAGGAGTTGTCGACTAAGGAAGAAGTGAAACCTAAGGAGGAGGTTGGTTGTGAGGTTAAGGATGCAGAGAAAGAGGCTGATAAAGTGCCTGATATTCAGGAGGATCCGACCGACAAAATGGCCGTTACTGAAACTGAACCTGGTTCTGTGGGGAATGGTAATGACGATAAAAGAGAGGAGTGTTTGGATGTCGGTGCTGAGTGCGAGGAGGAAACAAAGAAGGGTGGGGATGTGGAGAAGGAGAAGGTGGTGTTGAATGAAGAGGAGTCTAAAGAGGACAAGGGTGTAGATCTCGGAACCAGGACGGATGTTATCAAACCTGAGTTAAATGATGGAGTATCAACAGAAAATGAAGTCCCCAAGGAAGTGGACAGAGAAGTGACGATGGTGGGTCTGGTCAACAATGTAAAGGATAAGGGGAAAGGAATTTCTGTTGCACTTGCACCTCCTACTGATGTTGCTCATTCTTCGGATGATGGCTTGTGGATGGACAGAGGATCGATGGACCTCCCAACGTGTTCTGTTGATGTTATAGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTCTCCAGATCTCCTGTAAGGAAAGTGGAGAAAGTGGACCACTCGGTTCTCTACAAGCACAAGGATGACATGGAGCAGCTTGATCTTACTCTTAGCTTGCCGAATGTTTTGTTACCTATTGGTGCTCAAGAGACTGGAGCTCATGAAACAACATCACAAGCCCCTGGATCCCCCAGTCAAGCACGGAGTGTGCAGTCTTTAAGTAATACATTTTGTACCAACTCAGATGGTTTTCCTGCATCAATGTCCCTTTCAGGCTCCCAATCATTTTATCACAATCCAAGCTGTTCTTTGACAAAAAACTCTGTGGACTACGAACAATCTGTTGGCAGTCGCCCTTTGTTCCAGGGAATAGATCAAGTTTCTCAGGGGTGTTGGCAAGGCCAGTCTCAGAGTGATCCTAAACAGAAAGAAGTTCCTCTTGGTCAAAGAACATCGGTTAATGGAAATGGCTCCCTTTTCCAGTCTCAGACATCGTGGGGTGTTTTAGACAGTCAAGCTGTGAAGGGTCAACATTCCAGAGTTCTAGAAGGCAGTTCAAAAATTGCTGGTGGGCTTGATAGGCAATTGAGTTTTCACAAGCAGTTTTCAGGGCAATCAAGACGCCATGATGATGTTAGATCTCCGCCACAGAGTGTTGGGTCTCATGATATTGGATCAAATTACAGCTTTGAGAAAAAGAGGGAGGTTAGAGACAGGAGTAGTGGTAGTCTGTATCGAACTACCAGCCAGAAGGAACAAGAACAACTAATGATGGGTGGAGCTGATTTTGTTGAGACAATCATTGCAAGAATTGTTTCTGAACCTGTTCATGCAATGTCCAGAAAATTTCATGAAATGACAGGACAGTCCATAACATGTCTGAAAGAGGGTATTCGTGAAATCATGCTCAATGCTGATAAGCACGGGCAGATACTTGCTTTCCAAAAAGTTCTTCAGAACAGGTCTGATGTAATCTTGGATGTTCTGTTGAAGTGCCACAGAGTGCAACTGGAAATTTTGGTTGCTTTGAAAACTGGTTTGACTCATTTCCTTCACTTAGACAGCAGCATTTCGTCTTCTGAGTTGGCTCAAATTTTTCTGAACTCAAGGTGTAAGAATGTTTCATGTCGAAGTCAGTTACCCGTAGATGAATGTGATTGCAAGGTTTGTGCGCAGAAGAGTGGTTTTTGCAGGGAATGTATGTGCCTTGTGTGTTCTAAGTTTGACAATGCCTCAAATACATGTAGCTGGGTTGGATGTGATGTTTGCCTTCACTGGTGCCATACTGACTGTGGATTACGGGAATCTTATATTAGAAATGGGCATGGGACAAAAGGGATGGCTGAAATGCAGTTTCACTGTATTGCTTGTGACCATCCTTCTGAGATGTTTGGCTTTGTCAAGGAGGTTTTTCATAATTTTGCAAAAGAATGGTCTGTTGAAGCCCTTTGCAAAGAGCTTGAATATGTGAAGAGAATTTTTTCTGCTAGCAAGGATATGAGAGGGAGACAGTTGCATGAAATTGCAGAGCAAATGCTGCCAAGGTTGGCAAATAAGTCTAATCTTTCTGAGGTTTTGAGGCACATCATGTCTTTCCTTTCTGATGGTGATTCTTCCAAATTAGCCATGACAGCAAACTTTCCTGGGAAGGAGCAAATTAAAGAAAACAATGGAGTAGCAGGGCCTAGTCAGGAAGCAGCTTGGATGAAATCTATTTATTCAGAAAAGCCACCTCTGTTAGAGAGGCCAGCGAATATCCTTCCTACCTTCGACCAGAATGATAAAAGAACTCTTGCGCAAGAGTTGCAGATGAGTAGCATCCAGAAGGACTACTGTTTTGACGAATTGGAGAGTGTAGTAAAAGTTAAACAGGCAGAGGCTAAAATGTTTCAATCACGTGCTGATGATGCTAGAAGAGATGCTGAAAAGTTGAAGCGCATTGCCCTTGCAAAGAATGAGAAAATTGAGGAAGAATATGCCAATCGAATTGCCAAGTTGCGATTGACTGAGACTGATGAAATTCGTAAACAAAAATTTGAAGAAGCCCAAGCATTAGAGAGGGCCCATCTGGAGTATTTGAACATGAAAAGGAGAATGGAGACAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTGCCATGTGA 3576 0.4527 MKRLRSSDDLHSYGGDKNNNGCKDSGNLNRSFSSAQRSFYYKQDNARKGLVSSSSSRYERDRAVEEDREGSRVVRKRSEHDFEGFDRRKGFDRYRENDRSLMHRSESFCSGGSRRDQFPKGFRSERDRSRREGSVSSWRRGLKDLDERERVVRSPKGLRDVKSPSWSKDSVSESEQSKKRSSSPRPFREGNSNKSKSKSPTWSKDSVSESEQSKSVEVKKVEEELLQQVQSGSSSEMEEGELEPEPQTEMIAPASEDLTPSVALEADEKQVQKNECHPDDDDTDAIMHENQELSTKEEVKPKEEVGCEVKDAEKEADKVPDIQEDPTDKMAVTETEPGSVGNGNDDKREECLDVGAECEEETKKGGDVEKEKVVLNEEESKEDKGVDLGTRTDVIKPELNDGVSTENEVPKEVDREVTMVGLVNNVKDKGKGISVALAPPTDVAHSSDDGLWMDRGSMDLPTCSVDVIEGPSTRGFELFSRSPVRKVEKVDHSVLYKHKDDMEQLDLTLSLPNVLLPIGAQETGAHETTSQAPGSPSQARSVQSLSNTFCTNSDGFPASMSLSGSQSFYHNPSCSLTKNSVDYEQSVGSRPLFQGIDQVSQGCWQGQSQSDPKQKEVPLGQRTSVNGNGSLFQSQTSWGVLDSQAVKGQHSRVLEGSSKIAGGLDRQLSFHKQFSGQSRRHDDVRSPPQSVGSHDIGSNYSFEKKREVRDRSSGSLYRTTSQKEQEQLMMGGADFVETIIARIVSEPVHAMSRKFHEMTGQSITCLKEGIREIMLNADKHGQILAFQKVLQNRSDVILDVLLKCHRVQLEILVALKTGLTHFLHLDSSISSSELAQIFLNSRCKNVSCRSQLPVDECDCKVCAQKSGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHGTKGMAEMQFHCIACDHPSEMFGFVKEVFHNFAKEWSVEALCKELEYVKRIFSASKDMRGRQLHEIAEQMLPRLANKSNLSEVLRHIMSFLSDGDSSKLAMTANFPGKEQIKENNGVAGPSQEAAWMKSIYSEKPPLLERPANILPTFDQNDKRTLAQELQMSSIQKDYCFDELESVVKVKQAEAKMFQSRADDARRDAEKLKRIALAKNEKIEEEYANRIAKLRLTETDEIRKQKFEEAQALERAHLEYLNMKRRMETDIKDLLSKMEATKMSLAM* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 210 224 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 102 390 - -
Pvu11g0132 1191 Pfam Coiled-coil region of Oberon 1063 1179 IPR032535 -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 54 79 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 186 209 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 341 390 - -
Pvu11g0132 1191 Coils Coil 1099 1130 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 43 79 - -
Pvu11g0132 1191 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1190 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 754 776 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 793 808 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 808 823 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 834 855 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 880 900 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 950 969 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1086 1106 IPR004082 -
Pvu11g0132 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1125 1147 IPR004082 -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 524 543 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 673 725 - -
Pvu11g0132 1191 Pfam PHD - plant homeodomain finger protein 843 963 IPR032881 -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 268 331 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 699 713 - -
Pvu11g0132 1191 CDD PHD_OBE1_like 873 929 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 118 157 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 603 622 - -
Pvu11g0132 1191 MobiDBLite consensus disorder prediction 1 29 - -
Pvu11g0132 1191 PANTHER PROTEIN OBERON 4 1 1190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0132 Pvu-Chr11 981432 986567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0132 843 988 PHD Gene Family AT5G57380 26.712 3.05e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0132 - - gmx:100817003 1960.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0132 11 981432 986567 Pvu11g0132 11 981432 986567 ECH