Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0105 ATGGCAATAGCGATAACCCAATGCTCAGAAAAGCTAGGGTACCTCATTCTTCAGTTAGGCAAAAATTTCCTGGTGTATATGGCCATGGTGATTGCATGCAACGGTTTACATTTCCTTCTAAAGCCCTATTCACAACCTCGTATTACTTCCGACGTAGTTGTAGGGATAGTGATGGGGAACATTCCATTTTTACGAAAACTGTACGAAGAATTCAACAAGACATTTGGATTCATCATTGATTTTGGGATGATGTGTTACATGTTTGCTTTGGGTATAGAGTTGGATCCTTACACGCTCTTCAAAAGGCCCAACAAGGAGGCCCAAGTTGCTTATTGGGCCATTTTCAGCACCATGGCGATATCTCTTTCACTCACTCCGTTTCTACGTTTCTTCACGCACTACAACGGATTGGCGTTTGCTATGTCCCTCTCTGCGCTTCTCTCAAGTTCGGCTTCTCCGGTTCTGACCCGCGTGATAACGAGCCTGAAGATAGGGAAATCGGACATCGGAAAGCTTGTGATCGCTGCGGGAATGCACTCCGATTTGATCTGCTTGGTGATTCTCTCGCTCTGCTACATTTTCATGCCGAACGATATATACTGCATCGCGCACCAGAGTTTGAGGACGGTGAAGAGCACCATAATGATGTGCGTTGCGGTGGTGGTGCAGACGGTGTTCACGGCGGCGGTGTCGCCGATTTTCATGGAATGGGTGAACAACGAGAATCCTGAAGGGAAACCCATGAAAGGTTCTCATCTGGTGCTGTCAGTTGCATTCATGGCGATGATTTGTTTCCCATCAACGATGTACGACTATAGTCCGGTTCTGAGTGCGTTCATGACAGGGATTTGTCTTCCGAGAGAGGGAAGAGTTTCGAAATGGATTATCAGCAAAATCAACTATCTGTTGACGACGATCTTCTTCCCGATCTTCTTCTTGTGGGTGGGGTATTGTGCTGATATCACGAAGCTGAAACCTCTAGACCCTGTAACTTGGATAAGGCTTATTGTGCCGGTTTTCATAGTGGTGTCAGGGAAAGTTATTGGGACGCTTATTTCTGGGGCTATGCTTGACTTTCACTGGCAGGAGTCTGTTTTGATCGGATTGCTCCTCGTCACCAAGGGCCATTTTCAAATCTACATGGCAATGAAAGCGCTGAACTGTAACCACACCGATTCTTCCTCCACGGGCATTACGTCGGTGGTAACACTATTTTTCACAGTGGTGCATGCCCCAATAGTTGTGGGACATATCATCAAACGTGCCAGAAAAAGGGCACCTACTCACACCAACGCCCTCCAATTGCTGCAGCCATCAAGTGAGCTAAGAATATTCTTGTGCCTTCACGGACTCGAGAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGAGGGATATCAGACCCTGGCATTCAGATATATGTGGCAGAAATTATTGAATTAACTGAACATATAGCAGCAACAATGGAGAGTGGTGAAGGAGTACAAACTAGTACTATAAAAGACAAAGCCGTGATAGAGATGAGAGAGCAAATAACCAACTCGTTTCAAGCCTATGTAGATAACGATGGCGATGGTATCACTCTCAAAAGAACAATGGCACTGTCAACAATCCATAACATGGCACAGAACATCTGTGTTTTAGCAGAGGACTTGATGATTGCCCTCATTATACTTCCATTCCACAGGACCCAGCGTCAGGATGGAAAATTGGATGCTGGAAATCCTGGCTTCAGATATGTGAACCGAAAGTTATTGAAGAATTCTCCTTGCTCGGTGGGAATTCTAGTGAACAGAGGTTTTGGATCCCTTGAGAAAATATCAAGGGCTGAGGCATCAGTTAAAGTAGCAGCAATATTCATTGGAGGAAAAGATGATAGAGAGGCACTTTGTTATGCTGGTCGTGTGGCATGGCATCAGGGAGTGAAAGTGACAGTGATAAGATTCCTGGTAGATACCAGTGCAGAATCTACAAGACTTGCGGCTTATAGGGTGAGCCTCCCAGAAAAGGAGGAGGAAATGGGACTAGACGATGAATGTTTTGCACAGTTCTATGAACAGCATATAGTTGGAGGACGCATTGCGTATTTGGAGAAGCATCTTGCAAATGCATCAGAGACTTTCTCTACTCTTAAATCATTTGAAGGGGAATACTCACTGGTCATTGTAGGAAGAGAAGGTGGAGCAAACTCCATATTGACAAAGGGTATGAATGATTGGCAACAATGTCCAGAACTGGGACCAATAGGGGATGTTCTTTCAGGACCAGACTTCTCAAAGTCAGTGTCTGTGTTGATAATTCAACAGCACAAAATTAGAGGAGAAATAGATGGCCTTGATGAGGACTTCACTGTCATGTAG 2364 0.4497 MAIAITQCSEKLGYLILQLGKNFLVYMAMVIACNGLHFLLKPYSQPRITSDVVVGIVMGNIPFLRKLYEEFNKTFGFIIDFGMMCYMFALGIELDPYTLFKRPNKEAQVAYWAIFSTMAISLSLTPFLRFFTHYNGLAFAMSLSALLSSSASPVLTRVITSLKIGKSDIGKLVIAAGMHSDLICLVILSLCYIFMPNDIYCIAHQSLRTVKSTIMMCVAVVVQTVFTAAVSPIFMEWVNNENPEGKPMKGSHLVLSVAFMAMICFPSTMYDYSPVLSAFMTGICLPREGRVSKWIISKINYLLTTIFFPIFFLWVGYCADITKLKPLDPVTWIRLIVPVFIVVSGKVIGTLISGAMLDFHWQESVLIGLLLVTKGHFQIYMAMKALNCNHTDSSSTGITSVVTLFFTVVHAPIVVGHIIKRARKRAPTHTNALQLLQPSSELRIFLCLHGLENVPASINFMEISRGISDPGIQIYVAEIIELTEHIAATMESGEGVQTSTIKDKAVIEMREQITNSFQAYVDNDGDGITLKRTMALSTIHNMAQNICVLAEDLMIALIILPFHRTQRQDGKLDAGNPGFRYVNRKLLKNSPCSVGILVNRGFGSLEKISRAEASVKVAAIFIGGKDDREALCYAGRVAWHQGVKVTVIRFLVDTSAESTRLAAYRVSLPEKEEEMGLDDECFAQFYEQHIVGGRIAYLEKHLANASETFSTLKSFEGEYSLVIVGREGGANSILTKGMNDWQQCPELGPIGDVLSGPDFSKSVSVLIIQQHKIRGEIDGLDEDFTVM* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0105 787 PANTHER CATION/H+ EXCHANGER 3 4 785 - -
Pvu11g0105 787 PANTHER CATION/H + ANTIPORTER 4 785 - -
Pvu11g0105 787 Pfam Sodium/hydrogen exchanger family 27 415 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu11g0105 787 Gene3D - 21 428 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0105 Pvu-Chr11 768765 773336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0105 24 787 Antiporter Super Family AT3G52080 49.229 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0105 - - gmx:100815945 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0105 11 768765 773336 Pvu11g0105 11 768765 773336 ECH
Pvu11g0105 11 768765 773336 Pvu5g0253 5 2208714 2212107 PCT