Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0084 ATGAATAACAGTATGTGTTATGTCACTACGTTGCTGCTTTTTCTGGCTATGTGTGAAGCCACTTCAGGACTCACACAAGCTGATGCACTTCTTAGGTGGAAACAAAGTCTACCTCAACAACCAATTCTGGATTCCTGGGTGATGAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCACTGTCACTATAATCAACTTGGCTTATACTGGACTTGCAGGTACCCTTCACAATCTCAACTTTTCTGATTTTACAAACCTTCTTCGTCTTGACCTCAAAGAAAACAACCTCACTGGCTCCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTCCTTGACCTTTCCCAAAACTATCTCAATGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTTTCAAGAAATGATATATCAGGGGTATTAGACCCTACCCTTTTTCCTGATGGATCTCACACCCCCAAAACTGGTCTCATTGGTATCAGGAACCTTCTTTTCCAAGACACCTTGCTAGGTGGAACAATCCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACTACTTCCATGGTCCTATTCCCTCATCTCTAGGAAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGTCCAATACCTCCAAGTATTGGTAAACTAACCAATCTAACCGATGTGCGACTTTTCTCCAACAAATTAAATGGTAGTGTTCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGTTGCATCTTGCTGAGAACAACTTCGTTGGTGAATTACCACCACAGGTGTGCAAAAGTGGGAAACTTGTAAATTTTAGTGCAGCCTTTAATAGCTTCACTGGCCCAATTCCAAGAAGCCTCAGAGACTGTCCTTCCTTGTACAGGGTTCGACTTGAACACAACAGCCTCACAGGTTTTGCTGATCAGGATTTTGGAGTTTATCCCAACCTCACTTTCATGGACTTCAGCCATAACAGGATGAAAGGTAACCTCACTGCAAATTGGGGTGCCTGCCAAAACCTGCAACATCTGAGCATGGCTGGGAATGGAGTAAGTGGCAACATTCCAAGTGAGATTTTTCAGTTGGAACAACTACAAGAGCTTGATCTATCCTCCAACCAACTATCAGGAGAGATTCCTCCAATGATAGGAAACTCCAACTTGTATAAATTAAATTTGAGTGAAAACAAACTCTCTGGCATGGTACCAGTAGAAATTGGAAAGCTTTCCAATTTGGGATCCTTAGACCTTTCTATGAACATGCTACTTGGACCAATCCCCAATCAGATAGGGGAGCTCTCCAACTTGCAGAATTTAAATCTTAGCAACAACAAGTTTAATGGCACAATCCCCTACCAAATTGGAAACCTGGCAGATTTACAATATTTTTTGGATTTGAGTTACAATTCACTTTCAGGAGATATTCCCAGTGATCTTGGGAAGCTTTCAAATTTGATAACCTTGAATATCTCTCACAACAATCTGTCAGGTTCAATCCCTCACTCCCTTGGTGAACTGCTGAGTTTGTCAGTCATCGACCTCTCCCACAATAACTTGGAGGGTCCAGTTCCCAATGGTGGCATATTCAAGTCTTCCTTTCCTTTGGATTTGAGCAACAACAAAAATTTATGTGGGAATATTCAAGGTTTGCAACCCTGTAATGTCTCTCTCACTAAACCTGGTGGTGGTGGATCAAGTAACAAAAACAAGGTTGTGATCCTTATTGGGGCTTCCCTGGGAGGTGCTTTTTTGATTTCTCTGGTATTAGTTGGGGTTTTCTTCTTTATCTATAATAGAAAATCAAGAGCTCCAAGACAAAGAAACTCGTTCAGTAGACCGAATCCATTTTCAATTTGGTACTTCAATGGAAGAGTTGTGTATAGAGACATAATTGAAGCTACCAAGAACTTTGACAGCCAATATTGCATTGGGGAAGGAGCATTGGGGAAAGTCTATAAAGCTAAGATGTCAGGAGGTGAAGTATTTGCTGTGAAAAAGTTTAAGTGTGATTCAGAAAACTTAGACATGGAGAGAATAAAATCCTTTGAGAATGAGGTAGAAATCATGACAGAAACACGCCACAGAAACATTGTGAAGCTTTATGGATTTTGCTCTCAAGGGATGCACACCTTTCTGATTTATGAGTACATGGAGGGTGGCAACTTAGAGGAGATGCTGAGAGATGACAAGGGAGCATTGAAACTGAATTGGCACGAAAGGGTTGATATCATCAAGAGTGTAGCAAGTGCTTTGTCCTACATGCATCATGATTGTGCTTCACCTTTAATTCACAGAGACATATCAAGCAAGAACATTTTGCTGTCCTTCGATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCGGATTCTCCTATTTGGACATCATTTGCAGGCACATATGGTTATGCTGCTCCAGAGCTAGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCTTTGGAGGTTCTCACGGGGAAGCACCCTGGTGAGCTTGTTTCCTACATGCAAAGTTGTAGTGATGAACAGAAGGTAAATATGAAAGAGATTTTGGACCCTCGTGTCTTGGCTCCTTCCAAGGAGCATGTTTTGAAGCAAGTGGATTTGATTGCAAACATTGCTCTTTCATGTTTGAACACAAATCCTCAATCTCGACCAACTATGCGAACCATACTTCAGTTGCTTCAAATGGGAACTGCAGAAATATAA 2826 0.4158 MNNSMCYVTTLLLFLAMCEATSGLTQADALLRWKQSLPQQPILDSWVMNSTATTQTPCSWRGITCDSQGTVTIINLAYTGLAGTLHNLNFSDFTNLLRLDLKENNLTGSIPQNIGVLSNLQFLDLSQNYLNGTLPLSIANLTQVFELDVSRNDISGVLDPTLFPDGSHTPKTGLIGIRNLLFQDTLLGGTIPNEIGNIRNLTLLALDGNYFHGPIPSSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRLFSNKLNGSVPQEFGNLSSLIVLHLAENNFVGELPPQVCKSGKLVNFSAAFNSFTGPIPRSLRDCPSLYRVRLEHNSLTGFADQDFGVYPNLTFMDFSHNRMKGNLTANWGACQNLQHLSMAGNGVSGNIPSEIFQLEQLQELDLSSNQLSGEIPPMIGNSNLYKLNLSENKLSGMVPVEIGKLSNLGSLDLSMNMLLGPIPNQIGELSNLQNLNLSNNKFNGTIPYQIGNLADLQYFLDLSYNSLSGDIPSDLGKLSNLITLNISHNNLSGSIPHSLGELLSLSVIDLSHNNLEGPVPNGGIFKSSFPLDLSNNKNLCGNIQGLQPCNVSLTKPGGGGSSNKNKVVILIGASLGGAFLISLVLVGVFFFIYNRKSRAPRQRNSFSRPNPFSIWYFNGRVVYRDIIEATKNFDSQYCIGEGALGKVYKAKMSGGEVFAVKKFKCDSENLDMERIKSFENEVEIMTETRHRNIVKLYGFCSQGMHTFLIYEYMEGGNLEEMLRDDKGALKLNWHERVDIIKSVASALSYMHHDCASPLIHRDISSKNILLSFDLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLTGKHPGELVSYMQSCSDEQKVNMKEILDPRVLAPSKEHVLKQVDLIANIALSCLNTNPQSRPTMRTILQLLQMGTAEI* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0084 941 ProSiteProfiles Protein kinase domain profile. 665 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0084 941 SUPERFAMILY Protein kinase-like (PK-like) 638 934 IPR011009 -
Pvu11g0084 941 Gene3D Ribonuclease Inhibitor 167 243 IPR032675 -
Pvu11g0084 941 PRINTS Leucine-rich repeat signature 120 133 - -
Pvu11g0084 941 PRINTS Leucine-rich repeat signature 390 403 - -
Pvu11g0084 941 ProSitePatterns Tyrosine protein kinases specific active-site signature. 790 802 IPR008266 GO:0004672|GO:0006468
Pvu11g0084 941 Gene3D Phosphorylase Kinase; domain 1 632 744 - -
Pvu11g0084 941 SMART serkin_6 665 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0084 941 SMART LRR_typ_2 510 534 IPR003591 -
Pvu11g0084 941 SMART LRR_typ_2 270 294 IPR003591 -
Pvu11g0084 941 SMART LRR_typ_2 461 485 IPR003591 -
Pvu11g0084 941 SMART LRR_typ_2 390 414 IPR003591 -
Pvu11g0084 941 SMART LRR_typ_2 117 141 IPR003591 -
Pvu11g0084 941 SMART LRR_typ_2 246 269 IPR003591 -
Pvu11g0084 941 Pfam Leucine Rich Repeat 392 411 IPR001611 GO:0005515
Pvu11g0084 941 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Pvu11g0084 941 Pfam Leucine rich repeat 492 547 IPR001611 GO:0005515
Pvu11g0084 941 Gene3D Ribonuclease Inhibitor 24 166 IPR032675 -
Pvu11g0084 941 Gene3D Ribonuclease Inhibitor 244 338 IPR032675 -
Pvu11g0084 941 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 937 - -
Pvu11g0084 941 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 8 937 - -
Pvu11g0084 941 Gene3D Transferase(Phosphotransferase) domain 1 745 940 - -
Pvu11g0084 941 ProSiteProfiles Leucine-rich repeat profile. 392 414 IPR001611 GO:0005515
Pvu11g0084 941 Pfam Protein kinase domain 670 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0084 941 Gene3D Ribonuclease Inhibitor 339 587 IPR032675 -
Pvu11g0084 941 SUPERFAMILY L domain-like 56 427 - -
Pvu11g0084 941 SUPERFAMILY L domain-like 342 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0084 Pvu-Chr11 598003 601125 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0084 20 838 Receptor kinase-like Gene Family AT4G08850 40.676 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g0084 Pkinase 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0084 - - var:108339503 1540.01