Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0082 ATGATCTTCCATACATCTTATACCTGCCTTGCAAAGGTAATTCCAGCTACGTTGGTGCTTTTGCTGGCTATGTCTGAGGGCACTTCAGGACTCACACAAGCTGAGGCACTTCTTAGATGGAAGCAAAGTCTACCTGACCAACCAATTCTGGATTCCTGGGTGATGAACTCCACTGCAACAACTCAAACTCCATGTTCATGGCGAGGTATCACTTGTGATTCCCAAGGCACTGTCACTATAATCAACTTGGCTTATACTGGACTTGCAGGTACCCTTCACAATCTCAACTTTTCTGTTTTCCCAAACCTTCTTCGTCTTGACCTCAAAGTAAACAACCTCACTGGCTCCATACCACAAACCATTGGGGTGCTCTCAAACCTCCAGTTCCTTGACCTTTCCACCAACTATCTCAATGGCACTCTGCCTCTTTCCATGGCCAATCTGAGTCAAGTTTTTGAGCTTGATGTTTCAAGAAATGATATATCAGGGGTGTTAGACCCTGCCCTTTTTCCTGATGGATCTCCCACCCCCAAAAGTGGCCTCATTGGCATCAGGAACCTTCTCTTCCAGGACACCTTGCTAGGTGGCACAATCCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACAACTTCCATGGTCCCATTCCTCCATCTCTAGGCAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGGTCAATACCTCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCACCAACAACTTAAATGGTAGTGTTCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGCTGCATCTTGCTGAAAACAACTTCGTTGGTGAATTACCACCACAAGTGTGCAAAAGTGGAAAACTTGTAAATTTTAGTGCAGCCTTTAATAGCTTCACTGGCCCAATTCCAAGAAGCCTCAGAGACTGTCCTTCCTTGTACAGGGTTCGACTTGAATACAACAGTCTGACAGGTTTTGCGGATCAGGATTTTGGAGTGTATCCCAACCTCACTTACATGGACTTTAGCCATAACAGGGTGGAAGGTGAGCTCACTGCAAAATGGGGTGCCTGCAAAAACTTGCAATATCTGAGCATGGCTGGGAATGGAGTAAGTGGCAACATTCCAAGTGAGATTTTTCAGTTGGAACAACTACAAGAGCTTGATCTATCCTCCAACCAACTATCAGGAAAGATTCCTCCACAGATAGGAAACTCAACCTTGTATGAATTAAATTTGAGTGAAAACAAACTCTCTGGCATGCTACCAGCAGAAATTGGAAAGCTTTCCAATTTGCGATCCTTAGACCTTTCTATGAACATGCTACTGGGACCAATCCCCAAACAGATAGGGGGCATCTCCAACTTGCAGAATTTAAATCTTAGCAACAATAACTTTAATGGTTCAATCCCCTACCAAGTTGGAAATCTTGCATCTTTGCAAGATTTTTTGGACTTGAGTTACAATGAACTTTCAGGAGAAATTCCTTCTGATCTTGGGAAGCTTTCAAATTTGGTAAGCTTGAATATCTCTCACAACAATCTGTCAGGTCCAATCCCTGACTCCCTTAGTAAAATGGTGAGTTTGTCAGCCATCAACCTATCCAACAACAATTTAGGGGGTCCAGTTCCTGAAGGTGGTATATTCAACTCTTCTCATCCCGTGGATTTGAGCAACAACAAAAATTTATGTGGGAATATTCAAGGTTTGCAACCCTGTAATGTCTCTCTCACTAAACCTGATGGTGGTGGATCAAGTAACAAAAACAAGGTTGTGATCCCAATAGTTACATCCTTGGGAGGTGCTCTTATTATTTCTCTGGTGTGTGTTGGGATTGTGTTTTTCTGCTGCAAGAGAAAATCAAAAGCTCGAAGACAAAAAAGTTCAATAAAAAAACTGAATCCATTTTCCATTTGGTACTTCAATGGCAGAGTTGTGTATGGAGACATAATTGAAGCTACCAAGAACTTTGACCCCCACTATTGCATTGGGGAAGGAGCACTAGGAAAAGTCTATAAAGCAGAGATGAAAGGCCAAGTATATGCTGTAAAAAAGCTGAAGTGTGATGCAGAAAACATAGACATTGAGAGTATAAAAAGCTTTCAGAATGAGGTAGAAGCAATGTCAGAAACACGCCATCGAAACATTGTGAAGCTTTATGGATTTTGCTCTGAAGGGATGCATACATTTTTAATTTATGAGTATATGAATAGAGGGAACTTAGCAGACATGCTGAAAGATGAAAAGAATGCATTAGAACTAGATTGGTCCAAGAGGGTTGACATTGTGAAAGGTGTAGCAAGTGCTTTGTCCTATATGCATCATGATTGTGCTCCACCTTTGATTCACAGAGACATATCAAGCAAGAACATTTTACTCTCCTCCAATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCAGATTCACCTATTTGGACATCATTTGCCGGCACATATGGTTATGCTGCTCCAGAGCTAGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTTTGGCTTTTGAGGTTCTTACGGGGAAGCACCCTGGTGAACTTGTTTCCTACATACAAACTTCGAGTGAACAGAAAATAATCTTCAAAGAGATTTTGGACCCTCGTCTCTTGCCTCCTTCTAAGAGCAATATTTTGAAGGATTTGGCATTGATTGCGAACCTTGCTCTTTCATGTTTACAAACCAATGCTCAATCTCGACCAACTATGCGATACATAGCTCAATTACTTGAAATGGATACGTGCTGA 2835 0.4176 MIFHTSYTCLAKVIPATLVLLLAMSEGTSGLTQAEALLRWKQSLPDQPILDSWVMNSTATTQTPCSWRGITCDSQGTVTIINLAYTGLAGTLHNLNFSVFPNLLRLDLKVNNLTGSIPQTIGVLSNLQFLDLSTNYLNGTLPLSMANLSQVFELDVSRNDISGVLDPALFPDGSPTPKSGLIGIRNLLFQDTLLGGTIPNEIGNIRNLTLLALDGNNFHGPIPPSLGNCTHLSILRMPQNQLSGSIPPSIGKLTNLTDVRLFTNNLNGSVPQEFGNLSSLIVLHLAENNFVGELPPQVCKSGKLVNFSAAFNSFTGPIPRSLRDCPSLYRVRLEYNSLTGFADQDFGVYPNLTYMDFSHNRVEGELTAKWGACKNLQYLSMAGNGVSGNIPSEIFQLEQLQELDLSSNQLSGKIPPQIGNSTLYELNLSENKLSGMLPAEIGKLSNLRSLDLSMNMLLGPIPKQIGGISNLQNLNLSNNNFNGSIPYQVGNLASLQDFLDLSYNELSGEIPSDLGKLSNLVSLNISHNNLSGPIPDSLSKMVSLSAINLSNNNLGGPVPEGGIFNSSHPVDLSNNKNLCGNIQGLQPCNVSLTKPDGGGSSNKNKVVIPIVTSLGGALIISLVCVGIVFFCCKRKSKARRQKSSIKKLNPFSIWYFNGRVVYGDIIEATKNFDPHYCIGEGALGKVYKAEMKGQVYAVKKLKCDAENIDIESIKSFQNEVEAMSETRHRNIVKLYGFCSEGMHTFLIYEYMNRGNLADMLKDEKNALELDWSKRVDIVKGVASALSYMHHDCAPPLIHRDISSKNILLSSNLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGKHPGELVSYIQTSSEQKIIFKEILDPRLLPPSKSNILKDLALIANLALSCLQTNAQSRPTMRYIAQLLEMDTC* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0082 944 Gene3D Ribonuclease Inhibitor 327 594 IPR032675 -
Pvu11g0082 944 ProSitePatterns Tyrosine protein kinases specific active-site signature. 796 808 IPR008266 GO:0004672|GO:0006468
Pvu11g0082 944 ProSiteProfiles Protein kinase domain profile. 672 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0082 944 Pfam Leucine Rich Repeat 399 418 IPR001611 GO:0005515
Pvu11g0082 944 Pfam Leucine Rich Repeat 519 540 IPR001611 GO:0005515
Pvu11g0082 944 Gene3D Transferase(Phosphotransferase) domain 1 751 943 - -
Pvu11g0082 944 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Pvu11g0082 944 SMART serkin_6 672 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0082 944 SUPERFAMILY RNI-like 283 560 - -
Pvu11g0082 944 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 10 942 - -
Pvu11g0082 944 SMART LRR_typ_2 444 467 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 468 492 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 253 276 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 277 301 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 397 421 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 517 541 IPR003591 -
Pvu11g0082 944 SMART LRR_typ_2 124 148 IPR003591 -
Pvu11g0082 944 Gene3D Ribonuclease Inhibitor 175 307 IPR032675 -
Pvu11g0082 944 SUPERFAMILY L domain-like 62 384 - -
Pvu11g0082 944 PRINTS Leucine-rich repeat signature 400 413 - -
Pvu11g0082 944 PRINTS Leucine-rich repeat signature 444 457 - -
Pvu11g0082 944 Pfam Protein kinase domain 677 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0082 944 Gene3D Ribonuclease Inhibitor 31 174 IPR032675 -
Pvu11g0082 944 Gene3D Phosphorylase Kinase; domain 1 631 750 - -
Pvu11g0082 944 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 10 942 - -
Pvu11g0082 944 SUPERFAMILY Protein kinase-like (PK-like) 646 940 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0082 Pvu-Chr11 590517 593849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0082 3 844 Receptor kinase-like Gene Family AT4G08850 39.429 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g0082 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0082 - - gmx:100814345 1563.51