Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0081 ACCCTTCACAATCTCAACTTTTCTGTTTTTCCAAACCTTCTTCGTCTTGACCTCAAAGTAAACAGCCTCAGTGACTTCATACCACAAAACATTGGGGTGCTCTCAAACCTCCAGTTCCTTGACCTTTCCGAAAACTATCTCATTGGCACTCTGCCTCTTTCCATTGCCAATCTGACTCAAGTTTTTGAGCTTGATGTTTCAAGAAATAATATATCAGGGGTATTAGACCCTACCCTTTTTCCTGATGGATCTCACACCCCCAAAACTGGTCTCATTGGTATCAGGAACCTTCTTTTCCAAGACACCTTGCTAGGTGGAACAATCCCAAATGAAATAGGGAACATTAGAAACTTGACTCTGCTAGCTCTAGATGGAAACTACTTCCATGGTCCTATTCCCTCATCTCTAGGAAACTGCACACATTTAAGCATTCTTAGAATGCCTCAAAACCAACTCTCAGGTCCAATACCTCCAAGTATTGGTAAACTAACCAATCTAACCGATGTGCGCTTTTTCTCCAACAACTTAAATGGTAGTGTTCCCCAAGAATTTGGAAACTTGTCTTCCTTGATTGTGTTGCATCTTGCTGAGAACAACTTCGTTGGTGAATTACCACCAGAGGTGTGCAAAAGTGGGAAACTTGTAAATTTTAGTGCAGCCTTTAATAGCTTCACTGGCCCAATTCCAAGAAGCCTCAGAGACTGTCCTTCCTTGTACAGGGTTCGACTTGAATACAACATGCTCACAGGTTTTGCTGATCAGGATTTTGGAGTTTATCCCAACCTCACTTACATGGACTTCAGCTATAACAGGGTGGAAGGTAACCTCACTGCAAATTGGGGTGCCTGCAAAAACTTGCAATATCTGAGCATGGCTGGGAATGGAGTAAGTGGCAACATTCCAAGTGAGATTTTTCAGTTGGAACAACTACAAGAGCTTGATCTATCCTCCAACCAACTATCAGGAGAGATTCCTCCACAGATAGGAAACTCAACCTTGTATGAATTAAATTTGAGTGAAAACAAATTCTCTGGCATGGTACCAGCAGAAATTGGAAAGCTTTCTAATTTGCGATCCTTAGACCTTTCTATGAACATGCTACTGGGACCAATCCCCAATCAGATAGGGGAGCTCTCCAACTTGCAGAATTTAAATCTAAGCAACAACAAGTTTATTGGCACAATCCCCTACCAAATTGGAAACCTGGCAGATTTACAATATTTTTTGGATTTGAGTTACAATTCACTTTCAGGAGATATTCCAAGTGATCTTGGGAGGCTTTCAAATTTGATAACCTTGAACATCTCTCACAACAATCTGTCAGGTTCAATCCCTCACTCCCTTGGTGAACTGCTGAGTTTGTCAGTCATCAACCTCTCCAACAATAATTTGGAGGGTCCAGTTCCCAATGGTGGCATATTCAACTCTTCTTATCCCCTGGATTTGAGCAACAACAAAGATCTATGTGGGAATATTCAAGGTTTGCAACCCTGTAATGTCTCTCTCACTAAACCTGGTGATGGTGGATCAAGTAACAAAAACAAGGTTGTGATCCTTATTGGGGCTTCCCTGGGAGGTGCTTTTTTTATTTCTCTGGTGTTAGTTGGGATTTTTTTCTTTATCTACAAGAGAAAATCAAGAGCTCCAAGTCAAAGAAACTCGTTCAGTAGACCGAATCCATTTTCAATTTGGTTCTTCAATGGGAGAGTTGTGTATAGAGACATAATTGAAGCTACCAAGAACTTTGACAGCCAATATTGCATTGGGGAAGGAGCACTGGGAAAAGTTTACAAAGCTGAGATGTCAGGAGGTGAAGTATTTGCTGTGAAAAAGTTTAAGTGTGATTCAGAGAACTTTGACATGGAGAGAATAAAATCCTTTGAGAATGAGGTAGAAATCATGACAGAAACACGCCACAGAAACATTGTGAAGCTTTATGGATTTTGCTCTCAAGGGATGCACACCTTTCTGATTTATGAGTACATGGAGGGTGGCAACTTAGCTGAGATGCTGAGAGATGACAAGGGAGCATTGAAACTGAATTGGCACAAAAGGGTTGATATTATCAAGAGTGTAGCAAGCGCTTTGTCCTACATGCATCATGAATGTGCTTCACCTTTAATTCACAGAGACATATCAAGCAAGAACATTTTGCTGTCCTTCGATCTTTCAGCTCATGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCGGATTCTCCTATTTGGACATCATTTGCAGGCACATATGGTTATGCTGCTCCAGAGCTGGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCTTTGGAGGTTCTTACGGGGAAGCACCCTGGTGAGCTTGTTTCCTACATACAAAGTTGTAGTGATGAACAGAAGGTAAATATGAAAGAGATTTTAGACCCTCGTGTGTTGGCTCCTTCCAAGAAGCATGTTTTGAAGCAA 2466 0.414 TLHNLNFSVFPNLLRLDLKVNSLSDFIPQNIGVLSNLQFLDLSENYLIGTLPLSIANLTQVFELDVSRNNISGVLDPTLFPDGSHTPKTGLIGIRNLLFQDTLLGGTIPNEIGNIRNLTLLALDGNYFHGPIPSSLGNCTHLSILRMPQNQLSGPIPPSIGKLTNLTDVRFFSNNLNGSVPQEFGNLSSLIVLHLAENNFVGELPPEVCKSGKLVNFSAAFNSFTGPIPRSLRDCPSLYRVRLEYNMLTGFADQDFGVYPNLTYMDFSYNRVEGNLTANWGACKNLQYLSMAGNGVSGNIPSEIFQLEQLQELDLSSNQLSGEIPPQIGNSTLYELNLSENKFSGMVPAEIGKLSNLRSLDLSMNMLLGPIPNQIGELSNLQNLNLSNNKFIGTIPYQIGNLADLQYFLDLSYNSLSGDIPSDLGRLSNLITLNISHNNLSGSIPHSLGELLSLSVINLSNNNLEGPVPNGGIFNSSYPLDLSNNKDLCGNIQGLQPCNVSLTKPGDGGSSNKNKVVILIGASLGGAFFISLVLVGIFFFIYKRKSRAPSQRNSFSRPNPFSIWFFNGRVVYRDIIEATKNFDSQYCIGEGALGKVYKAEMSGGEVFAVKKFKCDSENFDMERIKSFENEVEIMTETRHRNIVKLYGFCSQGMHTFLIYEYMEGGNLAEMLRDDKGALKLNWHKRVDIIKSVASALSYMHHECASPLIHRDISSKNILLSFDLSAHVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLTGKHPGELVSYIQSCSDEQKVNMKEILDPRVLAPSKKHVLKQ 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0081 822 Gene3D Ribonuclease Inhibitor 2 271 IPR032675 -
Pvu11g0081 822 SUPERFAMILY L domain-like 5 276 - -
Pvu11g0081 822 ProSitePatterns Tyrosine protein kinases specific active-site signature. 707 719 IPR008266 GO:0004672|GO:0006468
Pvu11g0081 822 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 1 818 - -
Pvu11g0081 822 SUPERFAMILY RNI-like 189 485 - -
Pvu11g0081 822 Pfam Protein kinase domain 587 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0081 822 Pfam Leucine Rich Repeat 429 451 IPR001611 GO:0005515
Pvu11g0081 822 Pfam Leucine Rich Repeat 309 328 IPR001611 GO:0005515
Pvu11g0081 822 Gene3D Phosphorylase Kinase; domain 1 547 661 - -
Pvu11g0081 822 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 818 - -
Pvu11g0081 822 SMART LRR_typ_2 187 211 IPR003591 -
Pvu11g0081 822 SMART LRR_typ_2 58 82 IPR003591 -
Pvu11g0081 822 SMART LRR_typ_2 427 451 IPR003591 -
Pvu11g0081 822 SMART LRR_typ_2 378 402 IPR003591 -
Pvu11g0081 822 SMART LRR_typ_2 34 57 IPR003591 -
Pvu11g0081 822 SMART LRR_typ_2 307 331 IPR003591 -
Pvu11g0081 822 Gene3D Ribonuclease Inhibitor 272 370 IPR032675 -
Pvu11g0081 822 Gene3D Transferase(Phosphotransferase) domain 1 662 822 - -
Pvu11g0081 822 Gene3D Ribonuclease Inhibitor 371 498 IPR032675 -
Pvu11g0081 822 ProSiteProfiles Protein kinase domain profile. 582 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0081 822 SUPERFAMILY Protein kinase-like (PK-like) 555 793 IPR011009 -
Pvu11g0081 822 PRINTS Leucine-rich repeat signature 310 323 - -
Pvu11g0081 822 PRINTS Leucine-rich repeat signature 354 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0081 Pvu-Chr11 584312 586868 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0081 6 755 Receptor kinase-like Gene Family AT4G08850 42.933 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g0081 Pkinase 8.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0081 - - pvu:PHAVU_011G007800g 1612.05