Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0076 TTATGTGTTGATGTTGAAACTTTAGGGTTTAGCCCAGGAAAAGGGAAAATAAAGATGAAGGGTACCAACAAATTAGATATTAAGATGTTTCTATCAATTACTATTACCTCATTCACGTGTGGGGAGCGTTCTTTTTCAACATTGTGCTTTGCGTTGGCGCTTCATGAAATGACAGAGGCCCCTTTTAGGGCAATGGACGAATTTGATGTCTTCATGGATGCAGTAAGCAGAAAAATCAGCTTGGACACTCTAGTTGATTTTGCGGAGGCGCATGGATCACAGTGGATATTCATCACTCCGCATGATACTAGCATGGTGAGGACGGGAGACAGGATAAAAAAGATGCAGATGGCTGCTCCTCGTTCTTGA 369 0.4228 LCVDVETLGFSPGKGKIKMKGTNKLDIKMFLSITITSFTCGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQWIFITPHDTSMVRTGDRIKKMQMAAPRS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0076 122 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 37 122 - -
Pvu11g0076 122 Gene3D - 10 120 IPR027417 -
Pvu11g0076 122 CDD ABC_SMC6_euk 41 122 - -
Pvu11g0076 122 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 37 122 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pvu11g0076 122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 113 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0076 8 122 Structural Maintenance of Chromosomes family AT5G61460 65.323 1.86e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0076 K22804 - pvu:PHAVU_011G0073000 247.284