Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0075 ATTACTGTTTTTGGAGGAGGCAAAGTAATCAATTTGTTACAAATAATTGAGAGGCACCACCAAAGGTTTAAGATGCCTCCAATTGGTCCAATTGGTGCCCATTTGAAGCTTCTTCATGGCAATAAATGGGCACTTGCCCTTGAATATGCTATTGGGAGATTGCTCAATTCTTTTATAGTGACTAATCATGCGGATTGTCGTCTTTTGAAACAATGTGCGAAGGAAGCAAACTATGGTCACCTTCAAATTATTATTTATGATTTTTCAATCCCAAGGTTGACGATACCACAACATCTGCTTCCTGATACAGAACATCCATCAATTCTTTCTGTCTTACAATGTGAGAATCACACTGTGATTAATGTCCTAGTGGATCAGGGAAGTGTTGAGAGACAAGTTCTAGTCAAGGATTATGAAGTTGGGAAAGTGATTGCCTTTGAACGAAGGATCCACAATTTGAAGGAGGTCTACACAGCAAATGGATGTAGAATGTTTTCTCGAGGTCCAGTGCAGACTGTTCTTCATCCAAATAAGAGGCAAAGAACTGGTCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAGAAACTTCATGCTGAAGCATCTGATGAACAAAGGGTTGCCAATGAATGTAAAAGAAATAAAAGAGTGGCAGAAGTCAAGCTGGAGGAACTTGACAAAAATATGAGTTCTATTAAGAGACAATGTGTAATTGCTGGTAAAAGTTTTACTTCGAAGAAGCTAGCTCTGGAGGAAGAAATGCATTTGCACACCGCTGAAAATAGTGCAACACCTTTGTCCTCTGTTGATGAGCTTGTTGAAGAGATTTCAGAGATCCGGAAAAAAATAGAAGAAGAACAAGTTTTGCTAGAGGGCCGTCAGCAAAAGGGGCTTGAAGCAGCAGGAAAAGCAGATGATCTTAAAGTAAAATTTGACAAACTGTGTGAATCAGCGAATGGTGAAATTGCTGCCCTGGAGAAAGCTGAGAGTGAACTTGTAGAAATTGAAAAAGAAATGGGTTCTGCAAAAAAGGCAAAGGATCATTACGAGGGTGTCATGAAAAACAAGGTCCTACTTGATATTGAGGAGGCAGAGAACCACTCTCAGGAGCTTACAAAGAAGCGCGAGGAAAGCGTTGAAAAGGCTTCCATAATATGCTCTCAGAATGAACTTGATTCATTAGGAGGTTGTGATGGGAATACCCCGGAGCAAATCAGTTCTCAATTAGGAAGACTTAATCAGACACTTATGCGCGAGAGTCAAAGGTACTCTGAATCAATCGATGATCTTAGGATGCTGTATAAGAAAAAAGAGCGTAAGATTATGAAAAGGCAGCAAGTTTACAAAACCCTTCAACAGAAATTGGATGCTTGCCAGAGAGCTTTGGAGTTACGAACGAGAAAGTTTCAGAGAAATGCAACATATCTGAAGCACCAACTTTCTTGGAAATTTAATGGCCATTTGAGAAAGAAGGGGATTAGTGGACTTATCAAAGTTAATTATGAACAGAAAACCTTAATGATTGAG 1524 0.3944 ITVFGGGKVINLLQIIERHHQRFKMPPIGPIGAHLKLLHGNKWALALEYAIGRLLNSFIVTNHADCRLLKQCAKEANYGHLQIIIYDFSIPRLTIPQHLLPDTEHPSILSVLQCENHTVINVLVDQGSVERQVLVKDYEVGKVIAFERRIHNLKEVYTANGCRMFSRGPVQTVLHPNKRQRTGRLCGSFEDEIEKLHAEASDEQRVANECKRNKRVAEVKLEELDKNMSSIKRQCVIAGKSFTSKKLALEEEMHLHTAENSATPLSSVDELVEEISEIRKKIEEEQVLLEGRQQKGLEAAGKADDLKVKFDKLCESANGEIAALEKAESELVEIEKEMGSAKKAKDHYEGVMKNKVLLDIEEAENHSQELTKKREESVEKASIICSQNELDSLGGCDGNTPEQISSQLGRLNQTLMRESQRYSESIDDLRMLYKKKERKIMKRQQVYKTLQQKLDACQRALELRTRKFQRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEQKTLMIE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0075 508 Coils Coil 265 288 - -
Pvu11g0075 508 Coils Coil 433 453 - -
Pvu11g0075 508 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 1 508 - -
Pvu11g0075 508 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 1 508 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pvu11g0075 508 SUPERFAMILY Smc hinge domain 27 150 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Pvu11g0075 508 Coils Coil 353 380 - -
Pvu11g0075 508 Coils Coil 193 234 - -
Pvu11g0075 508 Coils Coil 317 344 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0075 1 508 Structural Maintenance of Chromosomes family AT5G61460 54.921 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0075 K22804 - gmx:100816916 852.047