Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0074 ATGAAACGGGGAAGAGAAGAGAGCATGGAGGAATCGAGTTCTAGGGTTTCGCCCACTCTTCACCATCCCACAGCAGGCATCATCAAGCGACTTCGCCTCGAGAATTTCATGTGTCATTCCAAACACGAGACCGAGTTCGGAAACCATGTCAATTTCATCACCGGCCAAAACGGAAGTGGTAAGAGTGCAATCCTAACTGCACTGTGTGTTGCATTTGGCTGTCGGGCCAAAGGAACTCAAAGAGCATCCTCTTTGAAGGATTTCATTAAAACTGGTGCCAGTAATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATATATGGTGACGTTATCAATGTAGAACGTAGGATATCTGAATCCACAAGTTCTACTACATTAAAAGATCACCAAGGAAGGAAAGTTGTTAGTCGAAAAGCAGAGCTTCTAGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGACTCAAGACAAAAGCAGGGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGATCTGCTGGAAAGCATTTTCAAGGAAATTACTATGGCATATGAAGTAATTAAAGAGTTAGAGACTGCAATAAGGCCCATAGAGAATGAACTTAATGAGCTGCAAGTTAAAATTAGAAACATGGAACATGTTGAACAAATATCCATACAGGTTCAGCAGTTAAAGAAGAAACTTGCATGGTCGTGGGTTTATGATGTGGACAAGCAACTAGAGGAACAAAATATAAAGATTGAAAAGTTGAAGAACCGGATACCTACTTGCCAGGCTAAGATTGATCAACAACTGCATTTGGTTGAAAAGTTGAAGGAAAGCTGCTCCAAGAAGAGGGATGAAATTGCAAGAATGTTGGAGAAGACATCACAAGTTAAGCAAATGAAGGAAAATTTAAACCAATCTGTGTCCATGGCAAAGAAAGAGGCATTTGAACTTGAGCGAGACTGCAAAAGCAAAACTAGCAACATACAGAAGATGGTACGGCAACTTAAAATGCTTGAACAACAAGTACAGGACATTCGCGAGCAGCATGCAAAAAATACTCAGGCTGAAGAATCTAACGTGGAGGAGAAACTGAAGGTGCTTAAAGATGAGGTTCATGCAGCTGAGTTAAAGCTTAAGGGATTGAAAGAAGAAGATGCTTCTTTAATGGAGAGCATACGTAGGCAAAATGATGAAATCCAAAAGATAGCTGATAAGATTCATGATCATGAAAAAAATCACCATGCTATCATGTGTCGAATCCGTGATCTTCAACAACATCAAAACAATAAG 1362 0.3928 MKRGREESMEESSSRVSPTLHHPTAGIIKRLRLENFMCHSKHETEFGNHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASSLKDFIKTGASNAVIQVEIQNEGEDAFKPEIYGDVINVERRISESTSSTTLKDHQGRKVVSRKAELLEIVEHFNIDVENPCVIMTQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESIFKEITMAYEVIKELETAIRPIENELNELQVKIRNMEHVEQISIQVQQLKKKLAWSWVYDVDKQLEEQNIKIEKLKNRIPTCQAKIDQQLHLVEKLKESCSKKRDEIARMLEKTSQVKQMKENLNQSVSMAKKEAFELERDCKSKTSNIQKMVRQLKMLEQQVQDIREQHAKNTQAEESNVEEKLKVLKDEVHAAELKLKGLKEEDASLMESIRRQNDEIQKIADKIHDHEKNHHAIMCRIRDLQQHQNNK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0074 454 Coils Coil 324 436 - -
Pvu11g0074 454 CDD ABC_SMC6_euk 28 182 - -
Pvu11g0074 454 Coils Coil 261 288 - -
Pvu11g0074 454 Coils Coil 215 242 - -
Pvu11g0074 454 MobiDBLite consensus disorder prediction 1 21 - -
Pvu11g0074 454 Pfam RecF/RecN/SMC N terminal domain 28 161 IPR003395 -
Pvu11g0074 454 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 23 454 - -
Pvu11g0074 454 Gene3D - 27 232 IPR027417 -
Pvu11g0074 454 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B 23 454 IPR027132 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Pvu11g0074 454 Coils Coil 296 316 - -
Pvu11g0074 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 337 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0074 24 454 Structural Maintenance of Chromosomes family AT5G07660 59.165 1.50e-171 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0074 K22804 - gmx:100816916 741.495