Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0073 ATGAAACCTTTTCTTCTCTTTCTCACATTCTCCTTCCTCTGCCAAACACACCAACTCCCACTTCTCTCTGCCACAACCCTCCCTCTCCCACTCATCTCCCTCCTCTCCATAAAATCATCCCTCCAAGACCCTCTCAACAACCTCCATGACTGGAACCCCTCCACCTCCAATCCCCAACTCCCAATATGGTGCTCATGGAGTGCCATCACCTGCCACTCCAAAACCTCACAAATCACCACCCTCGACCTCTCCCACCTCAACCTCTCCGGCACAATCTCCCCCCAAATCCGCCACCTTTCCTCCTTGAACCACCTTAACCTCAGTGGAAATGACTTCAGTGGGAGTTTTCAGTACGCCATTTTCGAACTACCAGAACTCAGAACACTAGACATCAGCCACAACTTCTTCAACTCTACCTTCCCACCCGGCACCTCAAAGCTCAGGTTCCTCAGGCATTTCAACGCCTACAGCAACAGCTTCACTGGACCCCTCCCCCAAGAGTTAACCAGCCTCCGTTTTCTGGAACACCTCAACCTCGGTGGAAGCTACTTCAGTGACGGGATTCCACCAAGCTACGGCACTTTCCCGAGACTCAAGTTTCTGGACTTAGCCGGCAACAGCTTGGGAGGTTCTCTTCCACCCCAATTGGGTCACTTGGCTGAACTTGAACACTTGGAAATTGGATACAACAATTTCTCGGGAACACTTCCTTCTGAACTCTCATTGCTCTCTAATCTCATATACTTGGACATCTCAAGTGCTAACATCTCCGGCAACGTGATTCCGGAGCTGGGAGAGCTCACCCACCTGGAGACACTTCTGCTGTTCAAGAACAGGTTAACAGGGGAAATCCCACCAACCATAGGAGCATTGAAGAAGCTGAAAAGCCTTGATCTTTCAGATAACGAACTCACTGGGTCAATCCCAACCCAAGTCACCATGCTAACGGAACTAACCACGCTCAACCTCATGGAAAACAACCTCACCGGAGAAATACCACAGGGTATCGGAGACCTCCCAAAGCTAGAGACTTTGTTCCTCTTCAACAACTCACTCACCGGAATCCTCCCTCAGCAACTAGGCTCCAATGGGTTGCTACTGAAACTAGACGTTTCCACAAACTCACTCGAAGGTCCCATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCGTGAGACTCATACTCTTTCTCAACAACTTCAGTCACACCCTTCCACCATCTCTTGCCACCTGCACCTCACTCGCCAGGGTTCGCATCCAGAACAATTTCCTCAACGGTTCAATCCCCGAAGGCCTCACGCTCCTCCCTAACCTTACATACCTAGATATCAGCAGCAACAACTTCCATGGTCAAATTCCGGCGAGCTTGGGTAACTTGCATTACTTCAACATCTCCGGAAACTCGTTCGGAAGCTCTTTGCCTGCATCCATTTGGAATGCAACTAATCTCGAGATCTTCTCCGCGGCTTCGTCGAACATCATTGGTGAAATTCCGGATTTCATTGGGTGTCAGCAGCTGTATAAGCTCGAATTGCAGGGGAATTTCATCAACGGTACGATTCCGTGGGACATTGGGCACTGTCAAAAACTGATTTTGCTCAATCTGAGTCGAAACTCGCTCACCGGAATAATCCCCTGGGAAATCTCTGCTCTCCCTTCCATCACCGGCGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCCTCGAACTTCAACAACTGCTCCACGCTCGAGAATTTCAACGTCAGTTTCAACTCGCTCACCGGTCCAATTCCATCCTCCGGCATCTTCCCAAACCTCCACCCTTCTTCATACTCCGGGAACCAGGGCCTCTGCGGCGGGGTGTTGGCCAAACCCTGCGCTGCGGACGCCCTCGCCGCCGCCACCGCCGACCAGGTCGACGTCCGCCGCCAGCAACCGAAGCGAACGGCCGGTGCAATCGTGTGGATCGTGGCCGCCGCGTTCGGCATCGGGCTCTTCGTGCTGGTGGCCGGCACGCGGTGCTTCCACGCAAACTACAACCGGCGGTTCGGCGAGGAGGTCGGGCCGTGGAAGCTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGAAGACGTGCTGGAGTGTTTGTCGATCTCCGACAAGATACTAGGAATGGGATCGACCGGAACAGTTTACCGCGCCGAAATGGCTGGCGGCGAGATCATAGCCGTTAAGAAGCTGTGGGGAAAACAGAAGGAGAATATCCGCCGGAGAAGAGGCGTTCTGGCGGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGAAACATCGTGAGGTTGTTGGGGTGCTGCAGCAACAGAGAGTGCACAATGCTGCTTTACGAGTACATGCCCAATGGCAACTTGGATGATTTGTTGCATGCCAAGAACAAAGGTGATAATCTCGTCGCTGATTGGTTCACCAGGTACAAGATCGCCCTGGGCGTTGCTCAGGGAATCTCCTACCTCCACCACGACTGCGACCCCGTCATCGTCCACCGTGATCTCAAACCCAGTAACATTCTACTGGACGCAGAGATGGAGGCAAGAGTCGCCGATTTCGGCGTCGCCAAGTTGATTCAGACCGACGAATCCATGTCTGTCATCGCTGGATCCTACGGCTACATTGCTCCAGAATATGCTTACACCCTTCAGGTGGATGAGAAGAGTGACATTTACAGCTATGGGGTGGTGTTGATGGAGATTCTGAGCGGAAAACGGTCTGTGGAAGCAGCTTTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGGTCAAAGATAAAGTCAAAAGATGGGATTGATGAGGTACTGGACAAGAATGCAGGAGCAGGGTGCAGATCAGTGAGAGAAGAGATGATTCAGATGCTCAGAATTGCATTGAACTGCACCAGTAGAAACCCTGCAGATAGACCTTCCATGAGGGATGTTGTGTTGATGCTGCAGGAGGCAAAGCCAAAGAGGAAGTTGCAGGATGGTGTTGCAGGTGGTGGTTGTGGAGGAGACACTGTTCTTGCTGCTCCTCACATTCCCTTCCCACAAAAACCAGTTGCAGACCAATGCTAA 3063 0.5211 MKPFLLFLTFSFLCQTHQLPLLSATTLPLPLISLLSIKSSLQDPLNNLHDWNPSTSNPQLPIWCSWSAITCHSKTSQITTLDLSHLNLSGTISPQIRHLSSLNHLNLSGNDFSGSFQYAIFELPELRTLDISHNFFNSTFPPGTSKLRFLRHFNAYSNSFTGPLPQELTSLRFLEHLNLGGSYFSDGIPPSYGTFPRLKFLDLAGNSLGGSLPPQLGHLAELEHLEIGYNNFSGTLPSELSLLSNLIYLDISSANISGNVIPELGELTHLETLLLFKNRLTGEIPPTIGALKKLKSLDLSDNELTGSIPTQVTMLTELTTLNLMENNLTGEIPQGIGDLPKLETLFLFNNSLTGILPQQLGSNGLLLKLDVSTNSLEGPIPENVCKGNRLVRLILFLNNFSHTLPPSLATCTSLARVRIQNNFLNGSIPEGLTLLPNLTYLDISSNNFHGQIPASLGNLHYFNISGNSFGSSLPASIWNATNLEIFSAASSNIIGEIPDFIGCQQLYKLELQGNFINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISALPSITGVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAAATADQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTAEDVLECLSISDKILGMGSTGTVYRAEMAGGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGISYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVEAAFGDGNSIVDWVRSKIKSKDGIDEVLDKNAGAGCRSVREEMIQMLRIALNCTSRNPADRPSMRDVVLMLQEAKPKRKLQDGVAGGGCGGDTVLAAPHIPFPQKPVADQC* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0073 1020 SUPERFAMILY L domain-like 366 614 - -
Pvu11g0073 1020 Gene3D Transferase(Phosphotransferase) domain 1 784 994 - -
Pvu11g0073 1020 SMART LRR_typ_2 435 459 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 195 219 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 267 291 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 551 574 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 315 338 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 123 147 IPR003591 -
Pvu11g0073 1020 SMART LRR_typ_2 339 362 IPR003591 -
Pvu11g0073 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 831 843 IPR008271 GO:0004672|GO:0006468
Pvu11g0073 1020 Pfam Leucine Rich Repeat 437 459 IPR001611 GO:0005515
Pvu11g0073 1020 Gene3D Phosphorylase Kinase; domain 1 688 783 - -
Pvu11g0073 1020 SMART serkin_6 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0073 1020 SUPERFAMILY RNI-like 81 435 - -
Pvu11g0073 1020 Pfam Protein kinase domain 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0073 1020 Gene3D Ribonuclease Inhibitor 337 628 IPR032675 -
Pvu11g0073 1020 Gene3D Ribonuclease Inhibitor 77 336 IPR032675 -
Pvu11g0073 1020 SUPERFAMILY Protein kinase-like (PK-like) 708 980 IPR011009 -
Pvu11g0073 1020 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 1005 - -
Pvu11g0073 1020 ProSiteProfiles Protein kinase domain profile. 705 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0073 1020 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Pvu11g0073 1020 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Pvu11g0073 1020 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Pvu11g0073 1020 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 4 1005 - -
Pvu11g0073 1020 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0073 Pvu-Chr11 527773 531713 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0073 34 995 Receptor kinase-like Gene Family AT1G08590 43.300 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g0073 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0073 - - gmx:100809695 1767.28