Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0058 ATGGATACTTTCACTCATGTACCCCCCGGTTTTAGGTTCCATCCAACAGATGAAGAACTTGTTGATTACTACCTTCGGAAGAAAATGGCTTCAAGGAGGATTGACTTGGATGTCATAAAAGATGTTGACCTCTACAAAATAGAGCCATGGGATCTTCAAGAGATTTGCAGAATAGGAACGGAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACTGCAGCAGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCAATCTATTCAAAGCATGAGTTGATAGGGATGAGGAAAACCTTAGTCTTTTACAAAGGTCGAGCTCCAAATGGACAAAAGTCAGATTGGATAATGCATGAATATCGCCTTGAAACAGATGAAAATGGCACTCCACAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAGTAACAACGATGCGTAAAGTGAGTGAACAGGATTCTCCTGGTTGGTACGATGATCAAGTATCTTTCATTCAAGACATGGACTCACCCAACAACACCTCTCAATCTAACTTGGTCTACCAGCTTCCCTATCCTTGCAAGAAAGAGCTAGATTTGCCCTATCAGGTCCCTCGCGACCACTTCCTCCAGCTTCCACTTCTAGAGACCCCAAAACTGCTTCAATCTGCTTCAGCCATAACTCCTAATCCCATGCCACCATATCTTCTAGATCATGTGAACCACTCCACTTCTCTGCTTCCCTCATTACTCATACAAGAAGAACAGCAAATGAACTTTCAGGCAACTTATGGCAACAACTCCAATGAACCAGCACTGGATCAAGTAACTGATTGGAGAGTGCTTGACAAGTTTGTTGCTTCACAACTCAGTCAAGATGCATCCAAACTCAATACCTACACAAACTCCACAGCCAATATCTTTCACAGCACAGACAATGGCAATTGCAATGTACAGTTCAGACATTTGGAGAAACAAGAGATAGTGATGCCTCAAGAAAATGCCTCAACATCAAACTCCAGCTGCCCAATTGCATTGTGGAAATAG 1071 0.4239 MDTFTHVPPGFRFHPTDEELVDYYLRKKMASRRIDLDVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHELIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRVTTMRKVSEQDSPGWYDDQVSFIQDMDSPNNTSQSNLVYQLPYPCKKELDLPYQVPRDHFLQLPLLETPKLLQSASAITPNPMPPYLLDHVNHSTSLLPSLLIQEEQQMNFQATYGNNSNEPALDQVTDWRVLDKFVASQLSQDASKLNTYTNSTANIFHSTDNGNCNVQFRHLEKQEIVMPQENASTSNSSCPIALWK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0058 356 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 342 - -
Pvu11g0058 356 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 342 - -
Pvu11g0058 356 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Pvu11g0058 356 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Pvu11g0058 356 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Pvu11g0058 356 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0058 Pvu-Chr11 421441 426171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0058 1 356 NAC Transcription Factor Family AT1G12260 56.198 6.87e-136 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu11g0058 NAM 5.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0058 - - gmx:100809525 614.379