Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0054 ATGGAGGCCATATCTTCCAAGCACCTCATCACGTCCCTTTTCATAATCATCGCTTCTAGTTTCACCGCACAAAGTGCCAGAAAAGTCAGCGAAAGACCATACCAAGAAGCGAGCATAGTGTTCATCAGAACATCGTGCAGTTCCACAACATATCCAACACTCTGCTACAGCTCCCTAGTGAAGCATGCAGACCTGATCCAAACAAATCGCATGGTGTTGACTGGCACGGCCCTTAACGTGACTCTTGCATCGGCGAAATCGACAGCAGCAATGATGTTGGCACTGGGAAAGAGACAGGGGCTGAAGCCAAGAGAGGTTGCAGCCATGAAGGACTGTGTGGAGGAGCTGAGAGACTCCGTGGATGAACTGAGAAGGTCCATCGATGAGATGAGTCATCTGAGAACCTCCAACTTCGAGATGACAATGAGCGACGTGCAAACGTGGGTGAGTGCTGCTTTGACTGATGAGAGTACCTGCAGCGATGGGTTCCAAGAGACAGCTACTGGTGCTACCAATATTAAGAGCACTGTGAGAGGGGAAGTTGTGCAGATAGCCCAATTGACCAGCAATGCATTGGCTCTGATAAATCAGCTAGCCAATTCCCATGGTTAA 612 0.4935 MEAISSKHLITSLFIIIASSFTAQSARKVSERPYQEASIVFIRTSCSSTTYPTLCYSSLVKHADLIQTNRMVLTGTALNVTLASAKSTAAMMLALGKRQGLKPREVAAMKDCVEELRDSVDELRRSIDEMSHLRTSNFEMTMSDVQTWVSAALTDESTCSDGFQETATGATNIKSTVRGEVVQIAQLTSNALALINQLANSHG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0054 203 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 198 IPR006501 GO:0004857
Pvu11g0054 203 Pfam Plant invertase/pectin methylesterase inhibitor 41 194 IPR006501 GO:0004857
Pvu11g0054 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 198 IPR035513 -
Pvu11g0054 203 SMART PMEI_2 37 194 IPR006501 GO:0004857
Pvu11g0054 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 198 - -
Pvu11g0054 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 200 IPR035513 -
Pvu11g0054 203 PANTHER 21 KDA PROTEIN-LIKE 10 198 - -
Pvu11g0054 203 Coils Coil 106 133 - -
Pvu11g0054 203 CDD PMEI-like_3 44 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0054 Pvu-Chr11 389913 391198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0054 22 201 Carbohydrate Esterase AT3G14310 28.962 9.71e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0054 - - gmx:100305537 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0054 11 389913 391198 Pvu11g0054 11 389913 391198 ECH