Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0053 ATGGAACTCATTTCTTCCAAGCATCTTCTCACAAATCTTCTCGTGATTATTGCTTCAACTTTCACCACACACAGTGCCAACAAAGGCACCGAAACACCATACAAAGAAGCTAACACAGTGTTCATCAGAACATCGTGCAGTTCCACAACTTATCCGAGACTCTGCTACAGCTCCTTGGTGAAGCATGCAGAGCTGATCCAAACAAACCGCGTGGTTTTAACGGGCGCAGCGCTCAACGTGACTCTTGCATCGGCGAAATCGACCTCCGCCGTGATGTCGGCGATGGCAAAGCGGCGGGGGCTGAAGCCGAGAGAGGTTGCGGCGATGAAGGACTGCGTGGAGGTGCTGAATGAGTCGGTGGAGGAACTGAGAAGGTCGATTAATGGGATGAGCGATCTGAGAAGGTCGAATTTTGAGATGACGATGAGTGACGTGCAAACGTGGGTGAGTGCTGCTTTGACGGATGAGAGCACTTGCATGGATGGGTTCGAAGAGAGTGAGATGAGCATTGATGGTACGAACACTAAGAGCCGTGTGAGAGGACTCGTTGTGCAGGTAGCCCAATTGACCAGCAATGCCTTGGCTTTGATTAATCAGCTGGCCAATCATGCTTAA 615 0.5057 MELISSKHLLTNLLVIIASTFTTHSANKGTETPYKEANTVFIRTSCSSTTYPRLCYSSLVKHAELIQTNRVVLTGAALNVTLASAKSTSAVMSAMAKRRGLKPREVAAMKDCVEVLNESVEELRRSINGMSDLRRSNFEMTMSDVQTWVSAALTDESTCMDGFEESEMSIDGTNTKSRVRGLVVQVAQLTSNALALINQLANHA* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0053 204 PANTHER 21 KDA PROTEIN-LIKE 10 201 - -
Pvu11g0053 204 CDD PMEI-like_3 44 202 - -
Pvu11g0053 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Pvu11g0053 204 SMART PMEI_2 37 196 IPR006501 GO:0004857
Pvu11g0053 204 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 200 IPR006501 GO:0004857
Pvu11g0053 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 201 IPR035513 -
Pvu11g0053 204 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Pvu11g0053 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0053 Pvu-Chr11 382584 384001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0053 15 200 Carbohydrate Esterase AT1G53830 32.984 7.26e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0053 - - vra:106755267 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0053 11 382584 384001 Pvu11g0053 11 382584 384001 ECH