Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0052 ATGGCTCTCTTTAGAACACTTCTATCACTTCTATTCCTCTCAACCTTTCTCCAACTAGCACAATCCACAACCACCAACGATTCCCTCAAAACCTACAAAAAGTTCATAAAAGATCAATGCAATGCCACCACTTATCCAATGGAATGCTACAAGGCTCTCTCCCCATATGCATCAAAAATCAAAAGAAACCACGTAACACTCACCAAACTCTCCATCAACGTGGCTCTAAAAGAAGCCAAGATAGCAAAAAGCACGTTGAAAAAGTTGTCGAAGGGGAAGCTATCAGATGGAGAAACGTCTGTGATTGATGACTGCAGAGAGAACATAGACGACACGTTGGATCTGCTTCAGCAATCTTCTGATGCGTTGGCACATTTGAACGGAAACTCCACTGCTGATGAGAGGTTTCAATGGGACAACATAAAGACTTGGGTGAGTGGTTCCATAACAGATGAATCTACATGCATCGATGAGTTTGATGAAATTCAAGTGCGTTCTTCACTGCAGAAGAAGATCAAAACCACCATTTATGATGTTTCTTCCTTGATTAGCATTGCCTTGGCATTCGTCAACACCCTTTTCTAA 585 0.4171 MALFRTLLSLLFLSTFLQLAQSTTTNDSLKTYKKFIKDQCNATTYPMECYKALSPYASKIKRNHVTLTKLSINVALKEAKIAKSTLKKLSKGKLSDGETSVIDDCRENIDDTLDLLQQSSDALAHLNGNSTADERFQWDNIKTWVSGSITDESTCIDEFDEIQVRSSLQKKIKTTIYDVSSLISIALAFVNTLF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0052 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 193 IPR035513 -
Pvu11g0052 194 CDD PMEI-like_3 40 193 - -
Pvu11g0052 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 3 193 - -
Pvu11g0052 194 SMART PMEI_2 31 189 IPR006501 GO:0004857
Pvu11g0052 194 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 3 193 - -
Pvu11g0052 194 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 193 IPR006501 GO:0004857
Pvu11g0052 194 Pfam Plant invertase/pectin methylesterase inhibitor 34 188 IPR006501 GO:0004857
Pvu11g0052 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 193 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0052 Pvu-Chr11 379275 380007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0052 31 193 Carbohydrate Esterase AT1G53830 27.273 1.56e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0052 - - gmx:100776299 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0052 11 379275 380007 Pvu11g0052 11 379275 380007 ECH