Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0051 ATGACAATGATGCCAAAGACATTGTTCACTCTGTTATTACTTTCCTCTGCTTTCTCAATAGCCACATCAAGAAGACATTCCCACACCAACAACATAGATTGGTGGTGCAGCCAAACCCCGTACCCCGACCCATGCAAATACTACATGAAACAACAAAGCCACCACCATCACAAACTCAAACACAAATCCGAATTCAGGGCAATTCTCATTCACTTGGCGTTGAACAGAGCAATGATCATGCGAAGGAAAGCACGCGAATTCGGGCACAAGGGGATCACCAAGAAGCAGAAATCAGTGTTCCGTGATTGTTTGAAGCTCTACGACAACACCGTTTTCCATCTCAACCGCACCATCGAAGGCCTTCACCAGAAAAAAAGCTGTTCACCCTTTGATGCACAAACGTGGCTCAGCACAGCTCGCACAAACATCGAAACATGTCAGAACGGGGCACTCGAACTTGGAGTTCAAGATTTCATGGCCCCCACCGAGAGATGCAACGTGACCGAGATCATAAGCAATGGCTTATTCGTGAACTGGGCATTCCTGAAGTACGAAAAGGTTCATTACACGGAAGATGCAGAGGCTGAATTTCCAAGTTGGTTTTCCACGCATGAGAGGAAGCTGTTGCAGTCTTCTTCGGTGAGGGCGCATCTTGTGGTGGCCAAAGATGGTTCGGGGCATTTCAAGAGTGTTCAAGCTGCTATCAATGCCGCTGCAAAGAGAAGGTTGAAGAGCAGATTTATCATACACGTGAAGAGCGGAGTTTATAGAGAGAATATTGAGGTTGACAAGACCAATGACAACATCATGTTGTTCGGTGATGGCATGAGAAACACCATCATCACAAGTGGCAGAAGCGTTAATGCCGGCTTCACCACCTACAGCTCCGCCACAGCAGGAATTGATGGGCTTCACTTCATTGCAAGAGACATTACCTTCAGAAACACGGCGGGTCCTCTAAAGGGTCAAGCAGTGGCACTTCGATCAGCCTCTGATCTCTCTGTGTTCTATCGATGTGCCATAGAAGGTTATCAAGACACACTCATGGTCCATGCACAGCGACAATTTTACAGAGGATGTTACATCTACGGCACAGTTGACTTCATTTTCGGAAATGCCGCTGTTGTTTTTCAAAACTGTGTCATTCTTGTAAGAAGGCCCTTAAATGGCCAAGCAAACATGATCACGGCCCAAGGTCGAGACGACCCATTTCAAAACACTGGGTTTTCAATCCATAACTCTCAGATCCGGGCTGCCCCAGATCTCAGGCCCGTTGTTGGCAAGTTCAACACCTTCTTGGGCCGGCCCTGGCAACGTTACTCTAGAGTTGTGGTAATGAAATCATTCCTGGATAGCATGGTGAGCCCAATGGGCTGGTCTCCTTGGGGGGACTCTAATTTTGCTTTGGATACTCTGTATTATGGAGAGTACAAGAACTTTGGGCCCGGTTCATCCACCAGAAACAGGGTACTGTGGCCCGGTTTTCATAGCATAAAAAGCCCAAATGAGGCATCGCGATTCACAGTTGCTAACCTTCTTGCTGGGCGCACGTGGTTGCCAGCCACTGGTGTGCCATTCACTTCTGGGCTTTGA 1593 0.4783 MTMMPKTLFTLLLLSSAFSIATSRRHSHTNNIDWWCSQTPYPDPCKYYMKQQSHHHHKLKHKSEFRAILIHLALNRAMIMRRKAREFGHKGITKKQKSVFRDCLKLYDNTVFHLNRTIEGLHQKKSCSPFDAQTWLSTARTNIETCQNGALELGVQDFMAPTERCNVTEIISNGLFVNWAFLKYEKVHYTEDAEAEFPSWFSTHERKLLQSSSVRAHLVVAKDGSGHFKSVQAAINAAAKRRLKSRFIIHVKSGVYRENIEVDKTNDNIMLFGDGMRNTIITSGRSVNAGFTTYSSATAGIDGLHFIARDITFRNTAGPLKGQAVALRSASDLSVFYRCAIEGYQDTLMVHAQRQFYRGCYIYGTVDFIFGNAAVVFQNCVILVRRPLNGQANMITAQGRDDPFQNTGFSIHNSQIRAAPDLRPVVGKFNTFLGRPWQRYSRVVVMKSFLDSMVSPMGWSPWGDSNFALDTLYYGEYKNFGPGSSTRNRVLWPGFHSIKSPNEASRFTVANLLAGRTWLPATGVPFTSGL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0051 530 Pfam Plant invertase/pectin methylesterase inhibitor 31 175 IPR006501 GO:0004857
Pvu11g0051 530 SUPERFAMILY Pectin lyase-like 213 529 IPR011050 -
Pvu11g0051 530 Gene3D - 211 530 IPR012334 -
Pvu11g0051 530 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 179 IPR035513 -
Pvu11g0051 530 Pfam Pectinesterase 218 515 IPR000070 GO:0030599|GO:0042545
Pvu11g0051 530 PANTHER PECTINESTERASE 1 529 - -
Pvu11g0051 530 CDD PMEI-like_3 34 178 - -
Pvu11g0051 530 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Pvu11g0051 530 PANTHER PECTINESTERASE 1 529 - -
Pvu11g0051 530 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 178 IPR035513 -
Pvu11g0051 530 SMART PMEI_2 27 177 IPR006501 GO:0004857
Pvu11g0051 530 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0051 Pvu-Chr11 373098 376189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0051 35 530 Carbohydrate Esterase AT5G51490 59.642 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0051 K01051 - gmx:100807908 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0051 11 373098 376189 Pvu5g0263 5 2284368 2289774 PCT