Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0032 ATGGCAGCTTTACTCATTGATCGCTCCTTCTTCTGTCACCTCTTCCTTTTCCTTTTTTGTCTTCCATCCATAAACACTCTCTCCACTGTTTCCATTTCTCAAACCTCCAATTCAAACCAAACATTTATTTGTGTCTTGCAACATCCAAATCAACAAGGACAATCAAATCTCAACTGCACCACCTTTCCCCAGGCTCAGACTCAGGCTATTACGCTTGATGTGAATCCTAATGTCACCTACTCTCAGATTGTGGGCGGCAACGGCTTTGTGTGTGCGTTGGGGCCATCGTCTTCTTCCATCTCCATCATGGGGTGTTGGAGATTCTCTGCCAATGCTACTAATGTTCCCTATAAACGCATCTACAGTGGACCCCTTGTTCAAGATATTGAGAGTAGCCACTCCCATGTTTGTGGTCTTGTAAATAGAGGAACTGATGAGAGTAGCCTTCAAGTTGAGTGTTGGCAATGGCATGACTTCAATTCAAGCAGTGGGAGTGTGAGGAACATGTCAATGTCAAGCATTGCAGTGGGAGAGAATTTTTTGTGTGGCTTATCATCAAGAGGGGATGTTAATTGCACAGGAACGGGGAGGGTGAATAGTAGCAGGGTTGTTGTTGATGTCCCTGCGCCTGGTGGGAATTACACTTTTCTTGCAGCCGGGTTTAGGCATGCCTGTGTGATCTCCATTGATGGTGGTTTGGTTTGTTGGGGAGACATGGAGGGTGAGAAACCCCAAGGGAGGTTCGTTTCTTTGGCGTTGGGAGAGAACCGCAGCTGTGCACTCGGGCATGACAGAAGAGTTGTCTGTTGGGGGTCCAATGATTTCATCATGCCGCACGCCTTAAAAGACACTTTTTTTGAGTCAATTGTGGCAAAGCAAAGTGTTTTCTGTGGAGTTGTGTCTTCCAATTATTCCTTGCTCTGTTGGGGTTCTCCGGTTTTTGATTCAGACAGCAAGGTGTTTGATGATGTGCTCCCAGGACCTTGTAGGAACAAGTGTCCCTGTGGGCCCTTGCCCAACTCTGCCAAACTATGTCAGTCTCCAGAAGTCATTTGCCAACCCTGTTCCCCTCAGGTGGTTCAATCTTCACCTCCATCACCATCTCCATTGCAGCCATCACCTCCATCATCATCTCCATTGCAGCCACCACCACCATCAAACCACACTGGTTGGAGCAGCCAAATGGTTGCATTCCTAGTGGTTGGATGTGTGGGCTGCAGTTCCCTGTTGCTAGTCATGGCTTTCTTCCTTCACAGGTACTGCAACTCCAAACGAAGAGGAAGCCGTGTCCATGATTCTGGCCGGTTGGATGGGTCATCTCACTCTCAACCACAACCTCAAGCTGAAGCAGGATCTCGAGTTCTTCAGAAGCGCCTGAGTCACGTTATCAGCATTGGAAATGGGAGCCCTTTTGAGGAGTTTTCCCTGGAGACACTGCTTCAAGTCACCAACAATTTCTGTGAGGACAAGAGAGTTGGGATTGGCAGCTTCGGTTCGGTGTATCATGCCACTTTGGAGGACGGGAAGCAGATTGCTATAAAGAGAGCTGAAGCCTCATCCTCCACCTACACTGTCTTGGGTGCCCAAGTGGACAAAGACAATGCTTTCATGAATGAGCTTGAATCTCTCTCAAGACTCCACCACAAGAACCTGGTTCGGTTGGTGGGGTTCTATGAAGACACCAAAGAACGCATTTTGGTGTACGAGTACATGGACAATGGGAGCCTGAGTGACCATCTCCACAAGCTCCAAACTTCAGCTCTGATGTCATGGGCAGTGCGCATCAAGGTGGCTCTGGATGCTGCCAGAGGCATAGAGTACTTGCACCAATACGCCACTCCTCCAATCATTCACCGTGACATAAAGTCTGCCAACATATTGTTGGATGCCAAGTGGACTGCCAAAGTCTCTGATTTTGGACTCTCCCTAATGGGACCTGACCCTGAAGATGAGGAGGCCCACCTTTCACTTCTGGCAGCTGGCACTGTTGGCTACATGGACCCTGAATACTACAGACTTCAACATTTGACCCCCAAGAGTGATGTCTATAGCTTTGGCGTGGTTTTGCTAGAGCTGCTCTCTGGTTACAAGGCCATCCATAAAAACGAGGATGGGGTGCCAAGAAATGTGGTTGATTTTGTTGTGCCATTCATTGTTCAAGATGAGATTCACAGAGTGTTGGACAAAAGAGTGCCCCCTCCCACGCCCTTTGAGATAGAGGCTGTGGCGTTTGTGGGTTATTTGGCAGCAGATTGTGTGAGGCTGGAAGGTCGAGATAGACCAACCATGTCTCAAGTTGTAAATAACTTGGAAAGAGCATTGGCTGCATGTTTAGCCCAACCAATACTCTCTAGGTCCACCACTCACTCTTCGGAAAATAATTTAACAACTCAAAATGAAATGCACTAA 2409 0.4795 MAALLIDRSFFCHLFLFLFCLPSINTLSTVSISQTSNSNQTFICVLQHPNQQGQSNLNCTTFPQAQTQAITLDVNPNVTYSQIVGGNGFVCALGPSSSSISIMGCWRFSANATNVPYKRIYSGPLVQDIESSHSHVCGLVNRGTDESSLQVECWQWHDFNSSSGSVRNMSMSSIAVGENFLCGLSSRGDVNCTGTGRVNSSRVVVDVPAPGGNYTFLAAGFRHACVISIDGGLVCWGDMEGEKPQGRFVSLALGENRSCALGHDRRVVCWGSNDFIMPHALKDTFFESIVAKQSVFCGVVSSNYSLLCWGSPVFDSDSKVFDDVLPGPCRNKCPCGPLPNSAKLCQSPEVICQPCSPQVVQSSPPSPSPLQPSPPSSSPLQPPPPSNHTGWSSQMVAFLVVGCVGCSSLLLVMAFFLHRYCNSKRRGSRVHDSGRLDGSSHSQPQPQAEAGSRVLQKRLSHVISIGNGSPFEEFSLETLLQVTNNFCEDKRVGIGSFGSVYHATLEDGKQIAIKRAEASSSTYTVLGAQVDKDNAFMNELESLSRLHHKNLVRLVGFYEDTKERILVYEYMDNGSLSDHLHKLQTSALMSWAVRIKVALDAARGIEYLHQYATPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPDPEDEEAHLSLLAAGTVGYMDPEYYRLQHLTPKSDVYSFGVVLLELLSGYKAIHKNEDGVPRNVVDFVVPFIVQDEIHRVLDKRVPPPTPFEIEAVAFVGYLAADCVRLEGRDRPTMSQVVNNLERALAACLAQPILSRSTTHSSENNLTTQNEMH* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0032 802 Gene3D - 56 322 IPR009091 -
Pvu11g0032 802 Gene3D Phosphorylase Kinase; domain 1 448 570 - -
Pvu11g0032 802 PANTHER OJ000114_01.11 PROTEIN 23 780 - -
Pvu11g0032 802 ProSiteProfiles Protein kinase domain profile. 486 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0032 802 CDD STKc_IRAK 492 772 - -
Pvu11g0032 802 MobiDBLite consensus disorder prediction 363 386 - -
Pvu11g0032 802 Gene3D Transferase(Phosphotransferase) domain 1 571 783 - -
Pvu11g0032 802 SUPERFAMILY RCC1/BLIP-II 79 313 IPR009091 -
Pvu11g0032 802 SUPERFAMILY Protein kinase-like (PK-like) 463 770 IPR011009 -
Pvu11g0032 802 MobiDBLite consensus disorder prediction 427 453 - -
Pvu11g0032 802 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Pvu11g0032 802 Pfam Protein kinase domain 488 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0032 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Pvu11g0032 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 23 780 IPR044815 GO:0004674
Pvu11g0032 802 SMART serkin_6 486 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g0032 802 MobiDBLite consensus disorder prediction 363 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0032 Pvu-Chr11 237814 240513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0032 26 789 Receptor kinase-like Gene Family AT5G47850 48.271 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu11g0032 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0032 - - pvu:PHAVU_011G003100g 1549.64