Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1721 ATGAAACTGCAGGCACATATTCCGGGGGAGATGTCTGGACAGGTACCTAATCAACCAGGGTCTCAGTTGTCTGGACTGACTCAGCTGAATGGGAATGCACTCGCTCATCAGATGCCAACTTTAGGGGGCGTACCCCGGTCAACAATTAATATGGATCCTGAATTTCTTAGAGCTCGCACTTTTATTCAAGAGAAGATATTTGATATGTTGTTGCAACGACAACAGCAGCCCGTTACAGATGTACAGAGAAAGAAGCTTAAGGATCTTGCGAAGCGCTTGGAGGAGGGCATGTTAAAAGCTGCTCGGTCTAAGGAGGATTACATGAACTTGGATACCTTGGAGAGTCGTTTATCAAATTTCCTCCGACGAGCATCTATGAGTAATCAAAACCAACACTATCCACAGCTTGTTAACTCTTCTCCAATCAGTACAATGATACCAACCCCTGGTATGTCACATGCTCCAAATTCAAGCATGATGGTAGCATCCTCCGTGGATACGTCAATGATTTATGCCAGCGGGTGTAATAGCATAGCATCAACATCTTTCAATAGTGTAAACATGTTACCAGCTGGTGGCATGCTTGGCAGTACCTTAAATAGATTTGATGGTTTGTCTAATGGTTATCAGCAGTCTTCTACCAGCTTTTCTGTTGCCTCAGGGGGGAACATTTCGTCAATGGGGGTGCAGAGAATTTCTAGCCAGATGATTCCCACTCCTGGATTCTCAGTCAGCAGTAGTCACTCACACATGAACATAGATTCTAATACTAATGGAGGTGCCTTTTCTGGTGTAGAGTCTACTATGGTACCACTGTCACAACTTCAGCAGCAGAAGCAGCATGTCGGTGGCCAAAATAGTCATGTATTGCAGAGTCTTAACAGTCAAATGGGTATTGGAATGAGATCTGGTTTACTACAGAAGCCATTTTCAAACTCAAATGGTGCTATAAATAGTGGATCAGGCTTGATTGGAAACAATATACAGCTTGCAAACGAACCTGGCACTTCTTCTGACAGCTATGCCTCCACTTATGCCAATTCACCTAAACACTTGCACCAGCACTTTGATCAAAATCAGAAACCAGCAGTGCAAGGTGATGGATATGGATTAAATAATGTTGACAATTTTCCTTCTGGAAACTGTTATACGTCTGCGACATCCTCTGGGCCCATGATGAACAATCAGAACACTAGTTCAGTTAAATTACCATCAATGCCCAAAACTAGCACATTGTTAAGTGGTCACTCGAACTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAACAAATTAACCAGTTAGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGATGGCTTTCTGCATTCTCAACAGCAATATCAGCAAAGGTCTCAACACTTGCAACAGCCAGATCAGTATGCACAGCAGCAATTTCAATCTATTCAAAGTCAGCAGCCTCAGCATGTGGTTAACAGTGACTCATTCAGTCAGTCTCAGCTTTCTCCCAATGTAGAAAACCGAGTGAAGCCTGAACCTGGAATTGAACACCGTAAAGAGGTGCTAAACTCTCGTGTCTCTGAACAGTTTCATATATCTGAGACGCAGAGTCTGTTCCAGCAGAACTCATCTGAAGATTGCTCTAGGGGTGCTCAACATCCTCCATTTCCATGTGGTCACCATGATTTATCATCATCAACACCTCAAAATTCACAACAAATGTTGCACCCACATCAATTGGCTGCAGAGCCTCAAAATAATTTTAGCGGTCCTACAGTTGGGGTGCAATCCAAATCTGTGATTCTAAACCAATGGCCTCAATCTCAAGATTGTAACCACATGCCTGACAGTAATTCACATGATCAACATCTCCATGTTGATTTTCATCAAAGAATATCTGGACAAGATGGAGCTCAATGCAATAATTTATCATCAGATGGATCTATTATTGTTCGAAATGTTCTTTCTAGAGGCTTGGCTGAGGAACTGGAATCTGGAATTGCTACAAATAAGGCGCACAGGAATCAACAGAGGTGGCTTTTATTTCTACTTCATGCTAAGCGATGTTCTGCCCCTGAAGGACGATGCAAAGAACGGTTTTGTTCTATTGCACAGAAGCTATGCAAGCACATAGATGTATGCAAAGTGCGCCATTGTCCATATCCTCGGTGCCATCATACGAGGGAGTTACTTCATCATTACGTAAACTGCAAGGATCCAGGTTGCCCTGTTTGTGTTTTTGTGAGAAAGTGTCGACGTGCTTTTCAATTGAAGCCTCAGATTCGGCCAGAACCTGAATCAAGCTTGCCAACTGCAGTGACTGGATCCTGTAAGCCTTACAATATTGTAGGCACATCACCAAGATTGATTTCAAAGCCTCCATTAGTTGTTGAAACTTCTGAGGACCTGCATCCATCTATAAAACGTATAAAGATTGAGCATTGCGCCCAGGCCATTAATCCTGAAAATAACCATTCTGCTTCATCTTTTACTGCAAATAGTGAATCTCTTGTTTCCAGGGATGCACAGTCTCAGCCCCAGCCCTATCCCAATGCTGAGAAATCTATCTCAATTAAACCCGAGTTTACAGAAGTTAAGGCTGAGGCTCCTGCACATGTGATACATGAAAAGCTCAGTGAGATGCAAATGGATAACAATAACGCTGATGATAAAATGCCTAGTGCTGAGCCTGTCAAATATGAAGAACCTGCTAATTTAGCTAGGCATGAAAATATAAAAACTGAGAAAGAAACTGGACAAGACCGGCAAGAAAATTTTGTGCAGACATCTGAAAATGCAGCTGGAACTAAGTCTGGTAAGCCAAAAATAAAGGGAGTCTCATTAACTGAGTTATTTACTCCAGAGCAAGTCAGGGAACATATCAGTGGACTAAGGCAATGGGTTGGTCAGAGCAAGTCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCGTGTCAATTGTGTGCTGTAGAGAAGCTTACCTTTGAACCACCACCTATTTATTGCACAACATGCGGGGTTCGCATCAAACGAAATAATATGTATTATACCACAGGCACTGGGGACACACGACATTATTTTTGTATTCCATGCTATAATGATGCTCGTACAGAGAACATAGTTGTTGATGGGACTCCCATTGCCAAGTCAAGACTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCATGGCAACATCAAATTTGTGCCCTATTTAATGGTAGACGAAATGATGGTGGACAAGCTGAGTATACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCCTTACCCCAAAGTGCTGTTCTTGGCGCCAAGGATTTACCAAGAACTATTCTTAGCGATCACATAGAACAACGATTATTTAGACGGCTAAAGCAAGAAAGACTAGAAAGGGCAAGGGTTCAAGGAAAAAGTTATGATGAGATTCCAGGAGCTGATGCTCTTGTTATAAGAGTTGTGTCATCTGTTGACAAAAAGTTAGAAGTGAAACCACGGTTTCTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCATATAAATCAAAGGTAGTTTTGTTGTTTCAGAAGATAGAAGGTGTGGAAGTTTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATCTCAATTCCCAAATCAGCGACGAGTGTATCTTTCGTATTTGGATTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACAGGAGAGGCTCTTCGGACTTTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGCTATATATGGGCTTGTCCTCCATTGAAGGGTGAAGATTATATTTTGTATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTACGTGAATGGTATCTATCCATGTTAAGAAAAGCTTCAAAGGAGAATATTGTGGTCGATCTCACCAACTTATACGATCATTTTTTCGTATCAACTGGTGAATGTCGGGCCAAAGTCACTGCTGCAAGACTCCCATATTTTGATGGCGACTACTGGCCTGGGGCTGCAGAGGATTTAATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAGGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCAGATCTTTCAGGAAATGCTTCGAAGGACCTGCTCCTCATGCACAAACTTGGTGAAACCATTTGCCCGATGAAGGAAGATTTTATTATGGTCCATTTGCAGCATGCATGTACCAGCTGTTGTATTTTAATGGTGTCTGGTAACCGTTGGGTCTGCAACCAGTGCAAGAATTATCAGATTTGTGATAAGTGTTATGAAGTAGAACTAAAGCGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAGCATACTCTTTATCCAGTTGAAATTACTGATGTTCCATCTGATACCAAGGACAAAGATGATATTCTTGAGAGCGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGCGGGCCAAGCATTCATCAATGATGGTCCTCTATCATCTTCACAATCCAACAGCTCCAGCATTTGTAACAACTTGTAATATATGTTATCTTGACATAGAAACTGGTCAAGGATGGCGCTGTGAGGTTTGCCCTGAGTATGATGTATGCAATGCTTGTTATGAAAAGGATGGACGTATTGATCATCCTCATAAGTTGACAAATCATCCATCCATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCATCGGGTGTTGCAGCTACGGAAAATGCTTGATCTCCTTGTTCATGCGTCCCAATGTCGTTCTCCACATTGTCAATATCCTAATTGTCGCAAGGTGAAGGGGCTTTTCCGCCATGGGATGCACTGCAAAATACGGGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCACGTACCACGATGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCTGCAGAAGTTGCTAACAATGCTGGTTGA 5208 0.4184 MKLQAHIPGEMSGQVPNQPGSQLSGLTQLNGNALAHQMPTLGGVPRSTINMDPEFLRARTFIQEKIFDMLLQRQQQPVTDVQRKKLKDLAKRLEEGMLKAARSKEDYMNLDTLESRLSNFLRRASMSNQNQHYPQLVNSSPISTMIPTPGMSHAPNSSMMVASSVDTSMIYASGCNSIASTSFNSVNMLPAGGMLGSTLNRFDGLSNGYQQSSTSFSVASGGNISSMGVQRISSQMIPTPGFSVSSSHSHMNIDSNTNGGAFSGVESTMVPLSQLQQQKQHVGGQNSHVLQSLNSQMGIGMRSGLLQKPFSNSNGAINSGSGLIGNNIQLANEPGTSSDSYASTYANSPKHLHQHFDQNQKPAVQGDGYGLNNVDNFPSGNCYTSATSSGPMMNNQNTSSVKLPSMPKTSTLLSGHSNLHGMQQAAHIKSQQINQLEKLNFQSSLTSRDGFLHSQQQYQQRSQHLQQPDQYAQQQFQSIQSQQPQHVVNSDSFSQSQLSPNVENRVKPEPGIEHRKEVLNSRVSEQFHISETQSLFQQNSSEDCSRGAQHPPFPCGHHDLSSSTPQNSQQMLHPHQLAAEPQNNFSGPTVGVQSKSVILNQWPQSQDCNHMPDSNSHDQHLHVDFHQRISGQDGAQCNNLSSDGSIIVRNVLSRGLAEELESGIATNKAHRNQQRWLLFLLHAKRCSAPEGRCKERFCSIAQKLCKHIDVCKVRHCPYPRCHHTRELLHHYVNCKDPGCPVCVFVRKCRRAFQLKPQIRPEPESSLPTAVTGSCKPYNIVGTSPRLISKPPLVVETSEDLHPSIKRIKIEHCAQAINPENNHSASSFTANSESLVSRDAQSQPQPYPNAEKSISIKPEFTEVKAEAPAHVIHEKLSEMQMDNNNADDKMPSAEPVKYEEPANLARHENIKTEKETGQDRQENFVQTSENAAGTKSGKPKIKGVSLTELFTPEQVREHISGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCIPCYNDARTENIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERLERARVQGKSYDEIPGADALVIRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSESQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTSCCILMVSGNRWVCNQCKNYQICDKCYEVELKREERERHPINQREKHTLYPVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYEKDGRIDHPHKLTNHPSMVDRDAQNKEARQHRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGMHCKIRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1721 1735 ProSitePatterns Zinc finger ZZ-type signature. 1562 1589 IPR000433 GO:0008270
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 819 849 - -
Pvu10g1721 1735 SUPERFAMILY FYVE/PHD zinc finger 1063 1103 IPR011011 -
Pvu10g1721 1735 ProSiteProfiles Zinc finger ZZ-type profile. 1557 1610 IPR000433 GO:0008270
Pvu10g1721 1735 Gene3D TAZ domain 662 750 IPR035898 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 819 850 - -
Pvu10g1721 1735 Gene3D - 1556 1610 IPR043145 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 907 938 - -
Pvu10g1721 1735 SUPERFAMILY TAZ domain 667 748 IPR035898 -
Pvu10g1721 1735 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1054 1102 IPR013083 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 454 511 - -
Pvu10g1721 1735 Gene3D TAZ domain 1614 1731 IPR035898 -
Pvu10g1721 1735 SMART TAZ_2 1620 1698 IPR000197 -
Pvu10g1721 1735 SMART TAZ_2 667 745 IPR000197 -
Pvu10g1721 1735 ProSiteProfiles Zinc finger TAZ-type profile. 1617 1700 IPR000197 -
Pvu10g1721 1735 PANTHER CBP/P300-RELATED 160 1734 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu10g1721 1735 SMART KAT11_2 1152 1449 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu10g1721 1735 Gene3D - 1433 1493 IPR043145 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 533 573 - -
Pvu10g1721 1735 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1119 1555 IPR031162 GO:0004402
Pvu10g1721 1735 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 160 1734 - -
Pvu10g1721 1735 Pfam Histone acetylation protein 1159 1380 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu10g1721 1735 ProSitePatterns Zinc finger PHD-type signature. 1030 1101 IPR019786 -
Pvu10g1721 1735 SMART zz_5 1436 1480 IPR000433 GO:0008270
Pvu10g1721 1735 SMART zz_5 1556 1602 IPR000433 GO:0008270
Pvu10g1721 1735 Pfam PHD-finger 1060 1102 IPR019787 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 454 503 - -
Pvu10g1721 1735 CDD PHD_HAC_like 1029 1101 - -
Pvu10g1721 1735 Pfam Zinc finger, ZZ type 1559 1601 IPR000433 GO:0008270
Pvu10g1721 1735 ProSiteProfiles Zinc finger TAZ-type profile. 665 745 IPR000197 -
Pvu10g1721 1735 SUPERFAMILY RING/U-box 1538 1606 - -
Pvu10g1721 1735 SUPERFAMILY RING/U-box 1417 1491 - -
Pvu10g1721 1735 SUPERFAMILY TAZ domain 1619 1702 IPR035898 -
Pvu10g1721 1735 ProSiteProfiles Zinc finger ZZ-type profile. 1437 1500 IPR000433 GO:0008270
Pvu10g1721 1735 Pfam TAZ zinc finger 674 742 IPR000197 -
Pvu10g1721 1735 Pfam TAZ zinc finger 1627 1697 IPR000197 -
Pvu10g1721 1735 MobiDBLite consensus disorder prediction 559 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1721 Pvu-Chr10 43243893 43257391 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pvu10g1721 HAT_KAT11 1.7e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1721 K04498 - gmx:100809207 3194.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1721 10 43243893 43257391 Pvu10g1721 10 43243893 43257391 ECH