Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1709 ATGAAGCTGACAAGAAGCATTTCGATATCAGCCCCAAAAGTTATTAAGAAGATCCCAACCCATCTGAAGTTGGCAATGGCATCCAGATCCTCAAGTTGCCATTATCAGCCTCTTTCCAAGAAGCCATTGCTGAATGAAGGAGAGTCCTCTGATGGCACAAGGAATGCCAAGGTTCCCAAAGGGTCCCTCGCAGTTTATGTGGGTCCCCATTATCGAAGGTTTGTCATTCCTGTTAGCTTCTTGGCCATGCCTGACTTCAGTGTTTTGATGGAATCTGTGGCTGAAGAATATGGCTGCGATCATCACGGTGCCATTCACATCCCCTGCGATGAAGACCTTTTTCAGAAAATTTTGACCTCCTGTTCCCAACGAAAACGGACCTTTCTCCCTCCTAAGATACCTTCCAACATCCCTATCATATCTACCCATTGA 432 0.4606 MKLTRSISISAPKVIKKIPTHLKLAMASRSSSCHYQPLSKKPLLNEGESSDGTRNAKVPKGSLAVYVGPHYRRFVIPVSFLAMPDFSVLMESVAEEYGCDHHGAIHIPCDEDLFQKILTSCSQRKRTFLPPKIPSNIPIISTH* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1709 143 PANTHER OS02G0143300 PROTEIN 43 123 - -
Pvu10g1709 143 MobiDBLite consensus disorder prediction 33 57 - -
Pvu10g1709 143 Pfam Auxin responsive protein 41 119 IPR003676 GO:0009733
Pvu10g1709 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1709 Pvu-Chr10 43112076 43112507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1709 58 118 Calmodulin-binding Proteins AT3G43120 57.377 4.86e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1709 K14488 - vun:114165672 211.46