Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1708 ATGATGGATTCAAAGAAGTGTAACAAGATCCGAGAGGTGGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAAGCTGCAACCTCTTCTGCTTCCAGCAATGCAGACATGGTTCCAAAGGGCTTCCTTGCTGTTTGTGTCGGGAAAGAGCTTCAGAAATTCATCATTCCCACCCATTACCTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCTCAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCATGTATCAGTCTTCCAGAAAATACTCAAGGCTGTGGAGGACAACAAACAACCCTTGCTACATCACTCTGGCTTCGATGGAGACAAAGACATCACTACTTCTTACGCATCAGATTGTGAAGTTACCCCCTCTCATCACCCTCAAACTTGTACATAG 423 0.4515 MMDSKKCNKIREVVRLQQILKKWKKAATSSASSNADMVPKGFLAVCVGKELQKFIIPTHYLRHQAFEMLLQEAQEEFGFQQEGVLKIPCHVSVFQKILKAVEDNKQPLLHHSGFDGDKDITTSYASDCEVTPSHHPQTCT* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1708 140 Pfam Auxin responsive protein 15 100 IPR003676 GO:0009733
Pvu10g1708 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 111 IPR003676 GO:0009733
Pvu10g1708 140 PANTHER OS02G0143400 PROTEIN 7 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1708 Pvu-Chr10 43110742 43113512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1708 2 136 Calmodulin-binding Proteins AT2G24400 45.029 8.20e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1708 K14488 - var:108320538 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1708 10 43110742 43113512 Pvu10g1708 10 43110742 43113512 ECH