Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1694 ATGAAGGACAAGGACAAAGAGAAGGAGACGGAGAAGAAGAAGTATCCGATCGGAGCCGAGCATTACCTTCTCTACGAAGAGATTGGCCAAGGCGTCAGCGCTTCCGTTCACCGCGCGCTCTGCGTTCCGTTCAATGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTGAACAACGTGTCTCGGGAGGCGCAGACGATGATCCTGGTGGACCACCCTAACGTGCTTAAATCGCACTGCTCGTTCGTCAGCGAGCACAATCTGTGGGTTGTCATGCCGTACATGTCTGGCGGCTCGTGCCTCCACATACTTAAAGCCGCGCATCCCGACGGGTTTGAGGAGGTTGTGATTGCGACCATTCTCAAAGAGGTGTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCTGGCAACATTCTCATCGATTCGCGCGGCGCCGTTAAGCTTGGCGATTTTGGCGTTTCCGCATGCCTCTTTGATTCTGGTGACCGTCAACGCACGAGGAATACGTTTGTTGGAACACCTTGCTGGATGGCCCCCGAGGTCATGGAGCAACTCCATGGCTATAACTTCAAAGCTGACATTTGGTCATTTGGTATTACGGCCTTGGAGCTTGCTCATGGTCATGCTCCATTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTTTGCAAAATGCACCACCTGGCCTTGACTACGAAAGGGATAAGAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCTAGCTGCTTGGTAAAAGATCCTACCAAGCGACCCTCTGCAAGCAAGTTGTTAAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAATGATCATATTCGAAGGCTCTTGGAGGGGCTGCCTGCTTTAGGTGATCGAATGGAGGCCCTGAAGAGAAAAGAAGAAGATATGCTCGCACAGAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAGGCTTCCTTGATCCATGATTTCGAAGATGTTATGTCCGATATGAATCATGCAGCAAGTTCAAGTTCTTTATCTACACTTGATTCACAAGAGAAACAATTACCGAGTGCATTTCACAACCCTTCTCGATCTGTTGATATGGAAGAAAATGATGAGACGCGAAATCAATCAGCTTCTGTTTCTGCAATTGATGCCAAAACTAGGCTTGAAAAATCCGAAGATGACTCTAGCATCACCAATTCAAGCCATGAACAACAAATTTATTCATCCTCTGTCGATGATCACGTGGACAGTAATTTGGGTGAGAAATCTGACATGGAAAACGGTGGAAAAATTGTGGAGGGAATGTCCACCCTTCATTATCATAGAAGAGGATGTTCATCAAGCATCTTACCAGAAGTTACCCTTCCACCAATTCGACCAGAAAGTGAGAAACTACAAAATCTGCCCCAGAACGGTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTACTTACTGAACTTCCATCAAGAGTCTCAAGATCATCAGTTAATTCTGATGACACTGATGAGAAATCGAAAGTGCCAGTTGTACAGCAAAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTTGCCCCTTCTCCTGTACTGCAAAAGAGTCATAGCATGCAGGTTTTTAGCCAGCATAATGTTCCTTCTGTACAACCAACTTTGCCATTATTACCAGCATCTGAAGCCACATCATCAAATCTTTCGGGCCAAGCTGTGTTTCCTATGTTGCACTCTGTACTGCAGACAAATATTCTTCAACAGGAAAGCATTTTATGTTTAATGAAGCTTATTACTGCCGGTGACTCTACAGCTGATGGCTCATGTACCCTAGCACAAATAGCAGGAGCTGAAAAATCTTTGCTTGAAGCAGCTCAGGATAGGGAGAAGGAGTTACTTCATGAGATAACTGATTTGCAATGGAGGCTTATCTGTGCTCAGGAAGAGCTTCAAAAATTGAAAACAGAAAATGCCCAGTGTGGAAAGGAAGGAGACGGGAAGTAA 2112 0.4574 MKDKDKEKETEKKKYPIGAEHYLLYEEIGQGVSASVHRALCVPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSEHNLWVVMPYMSGGSCLHILKAAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPTKRPSASKLLKHSFFKQARSNDHIRRLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMKAQASLIHDFEDVMSDMNHAASSSSLSTLDSQEKQLPSAFHNPSRSVDMEENDETRNQSASVSAIDAKTRLEKSEDDSSITNSSHEQQIYSSSVDDHVDSNLGEKSDMENGGKIVEGMSTLHYHRRGCSSSILPEVTLPPIRPESEKLQNLPQNGSSCNATSVPQTGEDVLTELPSRVSRSSVNSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVFSQHNVPSVQPTLPLLPASEATSSNLSGQAVFPMLHSVLQTNILQQESILCLMKLITAGDSTADGSCTLAQIAGAEKSLLEAAQDREKELLHEITDLQWRLICAQEELQKLKTENAQCGKEGDGK* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1694 703 MobiDBLite consensus disorder prediction 496 518 - -
Pvu10g1694 703 MobiDBLite consensus disorder prediction 430 446 - -
Pvu10g1694 703 MobiDBLite consensus disorder prediction 373 391 - -
Pvu10g1694 703 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 695 - -
Pvu10g1694 703 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 695 - -
Pvu10g1694 703 Coils Coil 658 699 - -
Pvu10g1694 703 Gene3D Transferase(Phosphotransferase) domain 1 103 336 - -
Pvu10g1694 703 MobiDBLite consensus disorder prediction 373 460 - -
Pvu10g1694 703 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Pvu10g1694 703 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Pvu10g1694 703 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1694 703 CDD STKc_OSR1_SPAK 20 283 - -
Pvu10g1694 703 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1694 703 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Pvu10g1694 703 MobiDBLite consensus disorder prediction 494 544 - -
Pvu10g1694 703 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1694 Pvu-Chr10 43026080 43033633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1694 11 678 MAP Kinase Kinase Kinase Kinase AT1G79640 64.897 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pvu10g1694 Pkinase 1.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1694 K08835 - gmx:100780339 1199.5