Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1692 ATGAGGCCGATGCAACTCCCACCGCCTTCCGCCTCCGCATCCGCCGCCGCTCCGGGACCGGCCAACAGCAAGGATCAGCGTCCCCAGCGCCGCCGCAAGGATCTCACGCTGCCGCTGCCGCAGCGCGACACTAATTTGGCGGTGCCGCTTCCTCTTCCGCCGTCCACGGCGCCGGCCCAGGCCAGCGGCGGGGCCAGCCAGCAGCAGCAGCAGCAGCAGGTGATCCCGTTCGCGGAGCTGGAGAGGATGAACCGAATCGGGAGCGGGAGCGGGGGGACGGTGTACAAGGTGGTCCACCGAACGACCGGGCGCGTGTACGCGCTGAAGGTGATATACGGCCACCACGAGGAGTCGGTGCGGCGGCAGATCCGCCGCGAAATCCAGATCCTGCGCGACGTGGACGATCCGAACGTGGTGAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTGCTGGAGTTCATGGACGGGGGATCTCTGGAGGGGAAGCACATCCCGCAGGAGCAGCAGCTGGCAGATCTGTCCAGGCAGATTCTGCGGGGGCTGGCGTATCTGCACCGGCGGCACATCGTGCACCGCGACATCAAGCCCTCTAATCTGCTGATAAACTCGCGCAAGCAGGTGAAGATTGCGGACTTCGGCGTGGGTCGGATTCTGAACCAGACCATGGATCCGTGCAATTCGTCGGTGGGAACGATCGCCTACATGAGTCCCGAGAGGATCAACACGGACATAAACGACGGGCAATACGACGCCTACGCCGGCGACATATGGAGCTTTGGGGTTAGCATATTGGAGTTCTACATGGGCAGGTTTCCCTTCGCTGTGGGGAGGCAAGGCGATTGGGCCAGCCTCATGTGTGCCATCTGTATGTCTCAGCCGCCGGAGGCTCCTCCTTCTGCCTCCCTCCACTTCAGGGATTTCATCTCCCGGTGCCTCCAGCGCGACCCCTCTCGCCGCTTGTCTGCCTCAAAGCTGCTCGAACACCCCTTCATTGCCGCTCCCCACTCCAACCACAATCAGCTTCCTCCCAATCTCCACCAGCTCCTCCCCCCTCCTCCTCCCCGGCCTCTTCCCTCCTAG 1092 0.63 MRPMQLPPPSASASAAAPGPANSKDQRPQRRRKDLTLPLPQRDTNLAVPLPLPPSTAPAQASGGASQQQQQQQVIPFAELERMNRIGSGSGGTVYKVVHRTTGRVYALKVIYGHHEESVRRQIRREIQILRDVDDPNVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPQEQQLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASLHFRDFISRCLQRDPSRRLSASKLLEHPFIAAPHSNHNQLPPNLHQLLPPPPPRPLPS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1692 363 Pfam Protein kinase domain 81 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1692 363 ProSiteProfiles Protein kinase domain profile. 80 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1692 363 Gene3D Transferase(Phosphotransferase) domain 1 162 347 - -
Pvu10g1692 363 MobiDBLite consensus disorder prediction 1 73 - -
Pvu10g1692 363 MobiDBLite consensus disorder prediction 59 73 - -
Pvu10g1692 363 Gene3D Phosphorylase Kinase; domain 1 56 159 - -
Pvu10g1692 363 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 27 352 - -
Pvu10g1692 363 SUPERFAMILY Protein kinase-like (PK-like) 80 356 IPR011009 -
Pvu10g1692 363 SMART serkin_6 80 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1692 363 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Pvu10g1692 363 CDD PKc_MAPKK_plant_like 78 335 - -
Pvu10g1692 363 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 27 352 - -
Pvu10g1692 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1692 Pvu-Chr10 43013417 43015249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1692 1 351 MAP Kinase Kinase Gene Family AT1G51660 68.421 5.68e-171 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu10g1692 Pkinase 6.2e-66 CL0016