Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1672 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCAGAGTTCATGAAGATGTTCCCAAGGAGGTAGAAAGCAAGCTTTTCTCGTTGGGAATGCCCAAGTTTAACGTGGAAGAAGAGTGTACTAATGAGTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGGTGAAATGCTCTCTGTGGTGTGTGAGAACTACAACACTTTGCGAAGCCATTTGATGGAATATACGAAGAAAAATGGTGAAAAAGAGACCAGCCCAACATCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAACAATAGTATTTGTGTTATGGGGACTAACAATGGAAACTCCGAGAGCAGCTCCACTGATGAAGAATCTTGCAAGAAACCGAGGGAAGAAACCATCAAACCAAAAATTTCGAGAGTTTATGTCAGAACCGAAGCTTCTGACACTACCCTTATTGTGAAAGATGGATACCAGTGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTGGCTACTTATGAAGGAGAGCACAATCATCCCCAAGCTTCTTCCCAAATGGAGGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGCTTCAGTGCCTTGTTCCGCATCTCTCAGCACTGCAACTCCAACACTTGTTACCCTTGACTTGACTAAATCTAAGGGTAGCAACAACAATTTCAAGAGCACAAGAACTAAAGTAGATTCACCTAAAGTAAAGCAGGTTTTGGTGGAACAGATGGCAACTTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATTATTAA 945 0.4307 MDCSSWINTSLDLNINPRRVHEDVPKEVESKLFSLGMPKFNVEEECTNELEEELKRVTAENKKLGEMLSVVCENYNTLRSHLMEYTKKNGEKETSPTSKKRKSESSNNNNSICVMGTNNGNSESSSTDEESCKKPREETIKPKISRVYVRTEASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASSQMEATSGSGRSVTLASVPCSASLSTATPTLVTLDLTKSKGSNNNFKSTRTKVDSPKVKQVLVEQMATSLTTDPNFRAALVAAISGRLLHNY* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1672 314 Pfam WRKY DNA -binding domain 161 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1672 314 MobiDBLite consensus disorder prediction 101 126 - -
Pvu10g1672 314 ProSiteProfiles WRKY domain profile. 155 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu10g1672 314 Coils Coil 47 67 - -
Pvu10g1672 314 SUPERFAMILY WRKY DNA-binding domain 156 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1672 314 PANTHER TRANSCRIPTION FACTOR 1 313 - -
Pvu10g1672 314 Gene3D WRKY domain 144 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu10g1672 314 MobiDBLite consensus disorder prediction 85 138 - -
Pvu10g1672 314 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 313 IPR044810 GO:0003700
Pvu10g1672 314 MobiDBLite consensus disorder prediction 85 100 - -
Pvu10g1672 314 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1672 Pvu-Chr10 42927172 42930758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1672 4 312 WRKY Transcription Factor Family AT1G80840 53.292 1.84e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu10g1672 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1672 - - gmx:100807966 519.62