Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1670 ATGGATCCGCAGAACGAACACGCCCAAGCTAACCCCAGAAACATAATCTTCAACAAATACGAGATGGGGCGGGTGCTGGGGCAGGGGAACTTCGCCAAGGTCTACCACGGCAGAAACCTCCTCACCAACGACAACGTGGCGATGAAGGTCATAAAGAAGGAGAAGCTGAAGAAGGAGCGATTCGTGAAGCAGATAAAACGCGAGGTTTCGGTGATGAAACTGGTGCGGCATCCCCACATCGTGGAACTGAAGGAAGTGATGGCCACCAAGGGAAAGATCTTCCTCGTCATGGAATACGTCAGGGGCGGGGAACTCTTCACCAAACTCAACAAAGGAAAACTCTCCGAAGACCTCGCCAGAAAGTACTTCCAGCAACTCATCAGCGCCGTCGACCACTGCCACAGCCGCGGCGTCACCCACCGCGATCTCAAGCCGGAGAATCTCCTCCTGGACCAGAACGAGGACCTCAGAGTCTCCGACTTCGGACTCTCGGCGCTGCCGGAGCAGCGCCGCGCCGACGGCATGCTCGTGACCCCGTGTGGCACCCCTGCTTACGTGGCGCCGGAGGTTCTGAAGAAAAAGGGCTACGACGGTTCAAAGGCTGATATATGGTCCTGTGGGGTCATTCTCTACACCTTGCTCTGCGGCTATTTACCCTTCCAAGGTGAGAACGTTATAAGAATCTATCGAAAAGCGTTTCGAGCTGAATATGAACTACCCGAATGGGTTTCGCCGCCGGCCAAAAATCTCATTTCGAATCTCCTCGTTGCTGATCCTGCAAAGAGGTATTCCATTCCCGATATAATGAACCACCCTTGGTTTCAATTGGGGTTCATGAGGCCCATTGCGTTTTCAACCAAGGACTCCGAGGTAGAACAGAGCTTCGACTTCGACGACGATGAGGTTCCAACGAGGAAACCCACGAGGCCGTTTTACAACGCGTTTGAGATAATCTCGTCCTTGTCGCACGGGTTTGATCTCAGGAGTTTGTTCGAGACGAGGAAGCGGTCGCCGTCGATGTTTATTTGTAAATTTTCGGCTTCGGCGGCGATGGCGAAGGTGGAGGCTGCTGCGAAGAAGCTGAATTTTAGGGTGACGGGGAAGAAGGAGTTTGTGGTGAGGATGCAGGGGGCGGAGGAGGGGAGGAAGGGGAAGTTGGCGATGACGGTGGAGGTTTTTGAGGTGGCGGCGGAGGTGGCGGTGGTGGAGTTTTCGAAGTCTGCCGGAGACACTTTGGAGTATATTAATTTGTGTGAAGAGCAAATGCGACCATCTCTGAAAGACGTTGTTTGGAGCTGGCAGGGTGATACCAATCACTTCTGCAACAATTAG 1332 0.5345 MDPQNEHAQANPRNIIFNKYEMGRVLGQGNFAKVYHGRNLLTNDNVAMKVIKKEKLKKERFVKQIKREVSVMKLVRHPHIVELKEVMATKGKIFLVMEYVRGGELFTKLNKGKLSEDLARKYFQQLISAVDHCHSRGVTHRDLKPENLLLDQNEDLRVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYTLLCGYLPFQGENVIRIYRKAFRAEYELPEWVSPPAKNLISNLLVADPAKRYSIPDIMNHPWFQLGFMRPIAFSTKDSEVEQSFDFDDDEVPTRKPTRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFICKFSASAAMAKVEAAAKKLNFRVTGKKEFVVRMQGAEEGRKGKLAMTVEVFEVAAEVAVVEFSKSAGDTLEYINLCEEQMRPSLKDVVWSWQGDTNHFCNN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1670 443 ProSiteProfiles NAF domain profile. 307 332 IPR018451 GO:0007165
Pvu10g1670 443 CDD CIPK_C 313 427 - -
Pvu10g1670 443 Gene3D Transferase(Phosphotransferase) domain 1 12 311 - -
Pvu10g1670 443 PANTHER CBL-INTERACTING PROTEIN KINASE 16 11 439 - -
Pvu10g1670 443 PANTHER - 11 439 - -
Pvu10g1670 443 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1670 443 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1670 443 SUPERFAMILY Protein kinase-like (PK-like) 16 323 IPR011009 -
Pvu10g1670 443 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1670 443 Pfam NAF domain 311 366 IPR004041 GO:0007165
Pvu10g1670 443 Gene3D Kinase associated domain 1, KA1 312 432 - -
Pvu10g1670 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pvu10g1670 443 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1670 Pvu-Chr10 42911990 42913864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1670 13 439 CBL-interacting serine-threonine protein kinases AT5G10930 61.149 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu10g1670 Pkinase 1e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1670 - - vun:114167214 765.763