Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1668 ATGCCAACTGACACGTCATCAGTTTCCGGCGAAACCGTCTGCGTGACCGGCGCCGGCGGCTACATAGCCTCTTGGCTTGTGAAACTTCTCTTAGAGAAAGGCTACACTGTCAGAGGAACCGTTCGAAACCCAGATGATCCGAAGAATGGCCATTTGAGAAAGTTAGAAGGAGCCAAGGAGAGACTCACTCTGCATAGAGTTGATCTCTTGGATATTGACTCCATTAAAGCTGCTTTTCACGGTTGCCACGGCGTCTTCCACACCGCTTCTCCGGTCACCGACAACCCCGAAGAGATGTTGGAGCCAGCAGTGAATGGAACGAAGAATGTGATAATAGGAGCTGCAGAAGAAAAAGTGAGACGAGTGGTGTTCACTTCGTCTATTGGCACGGTGTATATGAACCCCAACACGAGTAGGGATGTGGTGGTTGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAACTGGTATTGCTATGGGAAGACGGTGGCTGAAGAATCAGCATGGGATATGGCTAAAGAGAGAGGGGTGGATTTGGTTGTGGTGAACCCAGTTGTGGTTATTGGGCCATTGCTTCAACCTACCATTAATGCTAGCACAATCCACATCCTCAAGTACCTTACTGGTTCTGCTAAGACCTATGTAAATGCCACACAGTCTTACGTGCATGTCAAGGATGTTGCACTAGCCCATGTTCTTGTGTATGAGACTCCTTCAGCTTCTGGTCGCTACATCTGTGCCGAAAGTTCGCTGCATCGTGGTGAACTCGTTGAAATTTTGGCCAAGTTTTTCCCAGAGTATCCAATTCCCACCAAATGTTCAGATGAAAAGAACCCGAGAGTGAAACCGTACATATTTTCAAACGAAAAGCTGAAAGATTTGGGAATGGAATTCACCCCAGTGAAGCAGAGTTTGTATGACACCGTTAAAAATCTGCAAGACAACGGCCACCTTGCTGTGCCACCAAAGCAAGAACACTCCTATTGA 999 0.4725 MPTDTSSVSGETVCVTGAGGYIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLRKLEGAKERLTLHRVDLLDIDSIKAAFHGCHGVFHTASPVTDNPEEMLEPAVNGTKNVIIGAAEEKVRRVVFTSSIGTVYMNPNTSRDVVVDESFWSDLEYCKNTKNWYCYGKTVAEESAWDMAKERGVDLVVVNPVVVIGPLLQPTINASTIHILKYLTGSAKTYVNATQSYVHVKDVALAHVLVYETPSASGRYICAESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNEKLKDLGMEFTPVKQSLYDTVKNLQDNGHLAVPPKQEHSY* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1668 332 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 7 325 - -
Pvu10g1668 332 Gene3D - 11 332 - -
Pvu10g1668 332 CDD FR_SDR_e 13 299 - -
Pvu10g1668 332 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Pvu10g1668 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Pvu10g1668 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1668 Pvu-Chr10 42889543 42891617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1668 8 276 Monolignol Biosynthesis Gene Families AT1G80820 74.721 3.90e-144 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1668 K09753 - gmx:100811528 617.076