Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1663 ATGGATAGCGAGGAAGTCCCTTCAGCACCTTCAACACCTGCAACACCAGGGACTCCAGGGCTCCCTCTGTTTGGTGGCCTTAGGTTTGAGAAACCAAATATTGTTAGGAAATCATCCTTCCTCAGAAGCTGCAAATGCTTCAGTGTTGAAGAATGGACCTTGGAAGATGGAGCCATGCCTAGAGCCTCTTGCTCTTTACCAGCCCCTCCCATCCCTCTAGCAAAAAAGGTTGGAGCTGAGTTTATAGGCACGTTCATTCTGATGTTTGCTGCTATAGGCACTGCTATTGTGAACCAAAAGACTCATGGGTCAGAGACTCTAGTTGGATGTGCTGCAGCAAATGGACTCGCTGTCATGATCATCATTTTCTCCACTGGTCACATCTCTGGGGCTCATCTCAACCCCGCTGTCACCATTTCCTTCGCTGCATTAAAGCACTTTCCCTGGAAGAATGTGCCGGTGTATATTGGTACACAAATTTTGGCATCAGTGAGTGCTGCATTTGCTGTGAAGGCGGTTTTTAATCCCTTCATGAGCGGTGGAGTGACGGTCCCTTCTGTGGGATATGGGCAAGCTTTCGCCACAGAGTTCATTGTCAGCTTTATTCTCATGTTCGTGGTCACTGCAGTTGCCACCGACACAAGAGCTGTGGGAGAGCTTGCAGGAATAGCAGTGGGAGCCACAGTTATGCTCAACATACTTATAGCCGGGCCAGCCACTGGAAGTTCAATGAACCCTGTAAGAACATTGGGTCCTGCCATTGCTGCAAACAACTACAAGGGCATATGGGTCTATCTCATTGCTCCCATATTTGGGACTCTGTGTGGGGCAGGGGCCTACACTATGGTCAAGTTGCCCCAAGAAGAGGCTACAAAACCTCCCATTGTTGAAAGCTTCGGAAGGTGA 906 0.4912 MDSEEVPSAPSTPATPGTPGLPLFGGLRFEKPNIVRKSSFLRSCKCFSVEEWTLEDGAMPRASCSLPAPPIPLAKKVGAEFIGTFILMFAAIGTAIVNQKTHGSETLVGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQILASVSAAFAVKAVFNPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGSSMNPVRTLGPAIAANNYKGIWVYLIAPIFGTLCGAGAYTMVKLPQEEATKPPIVESFGR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1663 301 Gene3D Glycerol uptake facilitator protein. 69 294 IPR023271 -
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 PANTHER AQUAPORIN NIP2-1 3 290 IPR034294 -
Pvu10g1663 301 PANTHER BNAA02G36290D PROTEIN 3 290 - -
Pvu10g1663 301 SUPERFAMILY Aquaporin-like 72 289 IPR023271 -
Pvu10g1663 301 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Pvu10g1663 301 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu10g1663 301 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1663 Pvu-Chr10 42853087 42858205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1663 1 301 Major Intrinsic Protein MIP AT1G80760 72.549 1.17e-154 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1663 K09874 - gmx:100798410 507.679