Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1651 ATGGCAGCAAAGGCGGTGTGCGTGACCGGTGCTGGAGGCTTCGTAGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGCTACACTGTCCATGGAACTGTTCGAGAACCCGGTAGTGGCAAGTACGAGCACTTGCTGAAATTGGATGGAGCTTCTGAAAACCTCACACTCTTCAGAGCAGATCTCTTGAATTACGATTCTATTCTCTCTGCAATTGCTGGATGCGCTGCAGTTTTCCACGTTGCAAGCCCTGTGCCCTCAACCGTTGTTCCCAACCCTCAGGTAGAATTGATTGAACCTGCTGTGCAAGGAACAACTAATGTACTTCAAGCTTGTCTCGAAGCTAAAGTACAACGAGTTGTCTTTGTGTCATCAATATCTGCTATTTGCATTGGCCCGAATATGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGACAAAGATTACTGCAAAAAAACTCAGAACTGGTACTGTTATTCAAAGACAGAGGCAGAGGAGCGGGCCCTGGACTTTGCAAAAAGAACTGGACTTGATGTGGTAAGCATTTGCCCTTCCCTTGTGCTTGGGCCAATTTTGCAGTCAACCACTGTCAATGCAAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTGACTCATTTGAAAATAAGACACGTTGGATAGTCGATGTACGGGATCTAGTTGATGCAATACTCTTGGTGAATGAGAAGCATGAGGAAGAACGGAGATACATATGTAATGCACATACCATCAAGGCAAGGGATTTGACAGAGAAACTAAAGAGTATATATCCCAGCTACAAGTACCCTTCGAACTTTACCGAGGTGGATGATTACTTAAGGCTCAGCTCAGAGAAACTGGAAAGTTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTTCAGAGCTATCAAGATGCTGGCCTCCTGCAATCCCAATAA 960 0.451 MAAKAVCVTGAGGFVASWLVKLLLSKGYTVHGTVREPGSGKYEHLLKLDGASENLTLFRADLLNYDSILSAIAGCAAVFHVASPVPSTVVPNPQVELIEPAVQGTTNVLQACLEAKVQRVVFVSSISAICIGPNMPKDKVIDESYWSDKDYCKKTQNWYCYSKTEAEERALDFAKRTGLDVVSICPSLVLGPILQSTTVNASSLVLPKLLKGGDSFENKTRWIVDVRDLVDAILLVNEKHEEERRYICNAHTIKARDLTEKLKSIYPSYKYPSNFTEVDDYLRLSSEKLESLGWKYRSLEETLIDSVQSYQDAGLLQSQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1651 319 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 4 316 - -
Pvu10g1651 319 Pfam NAD dependent epimerase/dehydratase family 6 243 IPR001509 -
Pvu10g1651 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 311 IPR036291 -
Pvu10g1651 319 Gene3D - 1 319 - -
Pvu10g1651 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 316 - -
Pvu10g1651 319 CDD FR_SDR_e 6 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1651 Pvu-Chr10 42771044 42775017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1651 6 316 Monolignol Biosynthesis Gene Families AT2G33590 59.936 1.12e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1651 - - gmx:100784817 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1882 5 40358576 40361465 Pvu10g1651 10 42771044 42775017 PCT