Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1625 ATGGCAACGGCGACATACCCTCCACCGCCACCTTTTTACAGGCTTTACAAGGAGTACTTGCAAGACCCTAAGTCTGCTCCCGAGCCTCCGCCGCCCATTGAAGGGACTTACGTTTGTTTCGGAGGCAATTACACGACTAGTGATGTTCTGCCAAGCTTGGAAGAACAAGGAGTGCGCCAGCTCTATTCTAAGGGGCCTAATGTTGATTTCAAGAAGGAGCTGAGGTCACTTAATGGAGAGCTGCAACTACATGTCTTGGAGCTTGCTGATATTCTTATTGAGAGACCTTCACAGTATGCAAGGAGAGTCGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCATTGCGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAACACCGTAAACAGGCAGTGGAGGATATAAAGAGGAGGAGAGAAGAAGCACGACGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGTCATTAG 507 0.4615 MATATYPPPPPFYRLYKEYLQDPKSAPEPPPPIEGTYVCFGGNYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQHRKQAVEDIKRRREEARRLLNESLATLDGH* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1625 168 Gene3D - 60 159 IPR044888 -
Pvu10g1625 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pvu10g1625 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pvu10g1625 168 Coils Coil 137 164 - -
Pvu10g1625 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pvu10g1625 Med7 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1625 K15148 - gmx:100792250 304.679