Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1568 ATGGGTGTGAGCTCCAACAGAGTTGAGGACTTAGCATGCAACAATGGTTGCAACATGAAGAACCAAAGTGAGATACAAATGGCAATGCCAGTGGCAGCCATGGAAATCCACAAGGTTCAGTTGCCACCAGAACGCACCACCATGCAAAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCAGATGACCCTCTTCACAGGTTCAAGAACCAAACTTGCCTCATGAAACTTCTCCTTGCTCTTCAATACCTCTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGTTCTGACATCATCTCCGGTCTCACCATTGCAAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGCTAGCAAACTTGCCACCCATTATTGGATTATATTCCAGCTTTGTGCCTCCGCTGATATATTCCCTGCTTGGGAGTTCTAGACATATTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGTGAGACAGTTTCTTATGTTCAAGATCCTATTCTCTATCTCAAAATGGCTTTCACTGCCACTTTTTTTGCCGGATTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGACTTTCTCTCAAAGGCAACTCTGGTGGGTTTCATGGCTGGTGCAGCTATTATTGTGTCACTGCAGCAGCTGAAAGGGTTGCTTGGAATAGTTCATTTCACCACTAAGATGCAAATAGTACCTGTGCTCATCTCTGTTTTCAAGCAAAGACACGAGTGGTCATGGCAAAACCTTCTGCTGGGATTCAGTTTCCTACTATTCCTGTTGACAACAAGGCACATCAGCTTGAAGAAGCCAAAACTATTCTGGGTTTCAGCAGCTGCCCCGTTGACATCAGTCATTCTGTCAACCGTTTTAGTATTTTTTCTGAGAAATAAGACCCATAAAATTGCTATTATAGGTGCATTGCCAAAAGGGCTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTCTCAAAACAGGACTTGTCACTGGGATTTTGTCTCTCACTGAAGGAATTGCAGTGGGAAGAACATTTGCTGCACTGAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGTTCTTGTTCTTCATGCTACGTCACAACAGGGTCATTTTCTCGATCAGCTGTTAACTTCAATGCTGGGGCACAGACAGCAGTATCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCGCTGTTCCATTACACACCGAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTGTAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGACTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTCTAGGCCTTGGAATAGCGGTGGGAATATCAGTCTTCAAGATCTTGCTTAATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCGGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCTATCTACTTTGCTAATTCAACGTACCTGCAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACGATGAAAGTGCATTGAAGTGTATAATTTTGGACATGACAGCTGTTACAGCCATAGACACAAGTGGAATCGATACTCTATGTGAGCTTAGAAAGGTGCTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCACTCAAATATTTTAGATTCCTTTGGGTTGAAAGGTGTCTATCTCACAGTTGGAGAAGCTGTGGCTGACATTTCATCCTCCTGGAAAGCTCAGCCTTGA 1986 0.4325 MGVSSNRVEDLACNNGCNMKNQSEIQMAMPVAAMEIHKVQLPPERTTMQKLRHRLSEIFFPDDPLHRFKNQTCLMKLLLALQYLFPIFQWAPLYNLSLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHIGVGPVSIASLVMGSMLSETVSYVQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTTKMQIVPVLISVFKQRHEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTVLVFFLRNKTHKIAIIGALPKGLNPPSSNMLYFNGPYLALALKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNFNAGAQTAVSNIIMASAVLVTLLFLMPLFHYTPNVVLAAIIITAVVGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVGISVFKILLNVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFLILAVESPIYFANSTYLQERILRWVREEEERVKANDESALKCIILDMTAVTAIDTSGIDTLCELRKVLDKRSLQLVLANPVGNVMEKLHHSNILDSFGLKGVYLTVGEAVADISSSWKAQP* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1568 661 PANTHER SULFATE TRANSPORTER 24 661 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu10g1568 661 TIGRFAM sulP: sulfate permease 86 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu10g1568 661 Pfam STAS domain 531 649 IPR002645 -
Pvu10g1568 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Pvu10g1568 661 SUPERFAMILY SpoIIaa-like 535 652 IPR036513 -
Pvu10g1568 661 ProSitePatterns SLC26A transporters signature. 128 149 IPR018045 GO:0008271|GO:0008272
Pvu10g1568 661 Gene3D STAS domain 510 655 IPR036513 -
Pvu10g1568 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Pvu10g1568 661 Pfam Sulfate permease family 99 478 IPR011547 GO:0016021
Pvu10g1568 661 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1568 Pvu-Chr10 42062702 42066790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1568 1 661 Inorganic Solute Cotransporters AT3G15990 73.645 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1568 K17471 - gmx:100817604 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1568 10 42062702 42066790 Pvu10g1568 10 42062702 42066790 ECH
Pvu5g1772 5 39510544 39515067 Pvu10g1568 10 42062702 42066790 PCT