Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1566 ATGAGTGTGGTGGGTTTTGATTTCGGTAACGAGAGCTGCATTGTTGCAGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTCAATGACGAGTCGAAACGTGAAACGCCTGCCATTGTGTGTTTTGGTGAAAAGCAGCGGTTCCTTGGCTCTGCTGGTGCTGCCTCCAGTATGATGAACCCTAAGAATTCAATATCACAGTTTAAGAGGCTCATTGGTAGAAAATTCTCTGATCCCGAATTGCAACGGGATCTTAAGTCATTGCCGTTTCTTGTTACCGAGGGGAATGATGGGTACCCGTTGATTCACGTGCAGTACTTGGGTGAGGCTAGGAAATTTACACCTACACAAGTGTTTGGCATGATGTTGTCGAATCTTAAGGAGATTGCAGAGAAGAATCTCGGTACGGCTGTTGTTGATTGTTGCATTGGAATTCCGACTTATTTTACTGATTTGCAGAGGAGGGCGGTGTTGGATGCGGCCACGATTGTTGGTCTGCACCCGCTGCAATTGATTCACGAGATGACTGCCACTGCCTTGGCATATGGGATTTACAAAACGGATCTTCCAGAAAACGATCAACTGAATGTTGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGTTGAAAGTGTTGGCTCATTCGTATGATAGGTCTTTAGGTGGTAAGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTACTAAGTTCAAGGAGGAGTATAAGATTGATGTTGCCCAGAATACTAGGGCTTGCATAAGGTTGAGGGCTGCCTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATAGTGAGGCACCTCTCAACATCGAGTGTTTGATGGACGAGAAGGATGTTCGGGGCTTCATGAAGCGAGACGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAGGGGACCTTTGGAGAGGGCACTTGCTGAAGCAGGTCTTACCATTGAAAATGTACATACGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTACCTGCCGTAAATAAAATATTGACTGAGTTTTTCAAGAAAGAGCCTAGGCGAACAATGAATGCTAGTGAGTGTGTTGCCAAGGGTTGTGCATTGGAATGTGCAATTCTTAGTCCCACGTTTAAAGTACGAGAATTTCAGATCAATGAAAGCCTTCCTTTCTCGATTTCCCTTACATGGAAAGGTACTGGTCCAGATGCACAGGACAATGCACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCAATCCCAAGTATCAAAGCTCTAACATTCTACAGGTCAGGAACATTTTCTGTTGATGTACATTATGGCGATGTCAGTGAGCTGCAAACACCTGCCAAGATTAGCACATATACTATTGGTCCATTCCAAACTGCAAATAGTGAAAGGACAAAAGTGAAAGTGAAAGTTCGTTTGAATATTCATGGAATTGTATCTCTCGAGTCTGCAATGCTCCTGGAAGAAAAAGAAGTTGAGGTTCCGATTACCAAAGAAGCAGCAGGGGAAAATACTAAGCCGAACGAAGCCCCAGTTGAGGTTGCTACACCTCCAGCCTCCAATGACACTAGTGCAAATGTGCAAGATGAAAAGGTTAGTACTGCTTCGGGAGCTGAAAATGGTGTTCCTGAGAATGGAGATAAGCCTTCGCAAACAAACACTGATACCAAGGCTCCAAAGAAAAAGGTAAAAAAAACAAGCATTTCTATATCAGAGGTAGTTTATGGAGCAATGGTCCCTTTGGATGTCCAAAAAGCAATAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAGGAAACGAAGGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTCGTCATTGCTTCAGAGAGAGAAGATTTTACTGCCAAACTCCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCTAAGCTTGAAGAACTAAAAAAGCAAGGTGATCCAATTGAAGGGCGTTACAAAGAATACATGGAGAGGGGTAGTATAATTGAGCAATTCATATACTGTATAAATAGTTATAGAGAAGCTGCAAAGTCGAAGGACCCCAAATTTGATCACATTGACATTAGTGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAGAAATGGTTTACGGAGAAGCAACAACAACAAAACCCACTTCCAAAATATGTCAACCCTGTACTCTTGTCAGCTGAAATACGAAAGAAAGCTGAGATTGTTGATAGGTTCTGCAAGCCAATTATGACAAAACCAAGGCCAACCAAACCAACTACTTCAACTGGATCAGGAGCCCCATCTCCGCAGGATGATGAGCAGCAACACCCTCGAGGGGATGATGATAATGCCAACAGTAACGAAAATACTGGGGATAGAAGTAGCCAACCAATGGAGACTGATAAGTCTGAGAACGCAGGCTCTGCATAA 2526 0.4327 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFLGSAGAASSMMNPKNSISQFKRLIGRKFSDPELQRDLKSLPFLVTEGNDGYPLIHVQYLGEARKFTPTQVFGMMLSNLKEIAEKNLGTAVVDCCIGIPTYFTDLQRRAVLDAATIVGLHPLQLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGKDFDEVLFHHFATKFKEEYKIDVAQNTRACIRLRAACEKMKKMLSANSEAPLNIECLMDEKDVRGFMKRDEFEQLSLPILERVRGPLERALAEAGLTIENVHTVEVVGSGSRVPAVNKILTEFFKKEPRRTMNASECVAKGCALECAILSPTFKVREFQINESLPFSISLTWKGTGPDAQDNAPENQQSSLVFPKGNPIPSIKALTFYRSGTFSVDVHYGDVSELQTPAKISTYTIGPFQTANSERTKVKVKVRLNIHGIVSLESAMLLEEKEVEVPITKEAAGENTKPNEAPVEVATPPASNDTSANVQDEKVSTASGAENGVPENGDKPSQTNTDTKAPKKKVKKTSISISEVVYGAMVPLDVQKAIEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIASEREDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELKKQGDPIEGRYKEYMERGSIIEQFIYCINSYREAAKSKDPKFDHIDISEKQKVINECVEAEKWFTEKQQQQNPLPKYVNPVLLSAEIRKKAEIVDRFCKPIMTKPRPTKPTTSTGSGAPSPQDDEQQHPRGDDDNANSNENTGDRSSQPMETDKSENAGSA* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1566 841 Pfam Hsp70 protein 3 691 IPR013126 GO:0005524|GO:0140662
Pvu10g1566 841 MobiDBLite consensus disorder prediction 820 841 - -
Pvu10g1566 841 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Pvu10g1566 841 MobiDBLite consensus disorder prediction 786 803 - -
Pvu10g1566 841 CDD HSPA4_like_NDB 2 381 - -
Pvu10g1566 841 MobiDBLite consensus disorder prediction 805 819 - -
Pvu10g1566 841 Gene3D - 38 113 - -
Pvu10g1566 841 MobiDBLite consensus disorder prediction 530 566 - -
Pvu10g1566 841 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 624 IPR029047 -
Pvu10g1566 841 PRINTS 70kDa heat shock protein signature 2 15 - -
Pvu10g1566 841 PRINTS 70kDa heat shock protein signature 30 42 - -
Pvu10g1566 841 PRINTS 70kDa heat shock protein signature 140 160 - -
Pvu10g1566 841 PRINTS 70kDa heat shock protein signature 332 348 - -
Pvu10g1566 841 PRINTS 70kDa heat shock protein signature 363 383 - -
Pvu10g1566 841 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 589 IPR029047 -
Pvu10g1566 841 Gene3D - 5 374 - -
Pvu10g1566 841 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pvu10g1566 841 Gene3D - 594 702 IPR029048 -
Pvu10g1566 841 MobiDBLite consensus disorder prediction 778 841 - -
Pvu10g1566 841 Gene3D Actin; Chain A, domain 4 230 313 - -
Pvu10g1566 841 MobiDBLite consensus disorder prediction 510 574 - -
Pvu10g1566 841 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 840 - -
Pvu10g1566 841 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pvu10g1566 841 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 707 787 IPR029048 -
Pvu10g1566 841 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 595 690 IPR029048 -
Pvu10g1566 841 PANTHER HSC70CB, ISOFORM G-RELATED 1 840 - -
Pvu10g1566 841 Gene3D - 186 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1566 Pvu-Chr10 42049560 42054779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1566 4 405 Calmodulin-binding Proteins AT1G16030 35.802 9.04e-84 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1566 K09489 - gmx:100816539 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1566 10 42049560 42054779 Pvu10g1566 10 42049560 42054779 ECH
Pvu5g1768 5 39489977 39495214 Pvu10g1566 10 42049560 42054779 PCT