Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1565 ATGAGCAAAAACATTATCCTAAATTCTCCCAAAATCAAAATGTCAAAGAAAATCTCAAAATCCCTGAGAAACTACCTCTCCAAAATCAAACCCTGCCAACGTAAGATGAATCAATTATCCTCTAAGAAATTTCTGAAAGGGTGCAAGCATCCCAGGACTCCTTCTCTCGACATGGACAACAACAAAAACATCATCACCACCACCAAGGACGACGAAGCCATGTTAGCAGACATTGATCGCTTCCTCATTGAGAATTTCAAGAACCTGTTCCTCGAGAATCGGGAAGAAACAACCACCACCAAAGAACCCAAAGAAGATAAACCTCTCAAACTAGACTCTATCAGATTCGACTCTTCCACCAGGTTCGATGAGTCGCCACTGAACCTCTTCACAGACACCACAACCGAAGCAGGATCCAGTTTGACCATGTCGGAGATTGAGAGTGCGGAGGATCAAGCGGCGGTTCCGAGCAATTGTGTGGTTGTCCTGGCGAACTCCGCCAGACCCAGCGAGGATTTCCGCCGCTCCATGGAGGGCATGCTTGAAGCGAGATTGAAGAAGAGTGAAAAGGTGGATTGGGACTTCATGCAGGAGCTTTTGTTCTGTCACATGAATCTGAACCAGAAGAAGTGGCACAAGTTCATTCTCAGCGCCTTTGTGGACGTGGCCACCACCATGCGCCACCCGCCGGAGATTTCTCTGGCGAAGCCCCAGCCGCCGCAGAGTGTTCGGACTGTTAGGATCGGAAGGGAGGTGCGAAAGACAAAGGAAGCAATCACCTTGGAATTTGAGTCGCCCTAA 801 0.4856 MSKNIILNSPKIKMSKKISKSLRNYLSKIKPCQRKMNQLSSKKFLKGCKHPRTPSLDMDNNKNIITTTKDDEAMLADIDRFLIENFKNLFLENREETTTTKEPKEDKPLKLDSIRFDSSTRFDESPLNLFTDTTTEAGSSLTMSEIESAEDQAAVPSNCVVVLANSARPSEDFRRSMEGMLEARLKKSEKVDWDFMQELLFCHMNLNQKKWHKFILSAFVDVATTMRHPPEISLAKPQPPQSVRTVRIGREVRKTKEAITLEFESP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1565 266 Pfam Transcriptional repressor, ovate 166 225 IPR006458 -
Pvu10g1565 266 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 15 247 - -
Pvu10g1565 266 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 15 247 IPR038933 GO:0045892
Pvu10g1565 266 ProSiteProfiles OVATE domain profile. 162 225 IPR006458 -
Pvu10g1565 266 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 160 225 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1565 Pvu-Chr10 42045889 42047173 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu10g1565 Ovate 8.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1565 - - gmx:100777653 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1565 10 42045889 42047173 Pvu10g1565 10 42045889 42047173 ECH
Pvu5g1766 5 39468605 39469826 Pvu10g1565 10 42045889 42047173 PCT