Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1555 ATGAACAGACAGGGGCAGAGATCCGGTGCGACGGGGGTGCACCATAACCGCCAGCACTCCGAACACTATCTCGATGCTTCTTCCAAGTGGTTCAACTCCTCCTCCAATCACATTCCTCCTCTTCAGGACTACAATTCGTACGGTGGCGGAGGCAGAATGTACCGGAACAACGTGCAGAAGAGCTTCAGTGAGTACTGTATGGATCCGTTAACGCCTCCTCGTAGTTACACCGTTAAGAAAAACGGCGACGAGGACGATTCTCCTCGCGATTTCAGCCCTGGCCTGTTGGATCTCCACTCGTTCGATACGGAGCTTCTTCCTCAGATTCCGTCCTCGAACGCGTATGATTTCGAGCCTTACATTTTCGGCAAACAAACTGGCAGAGCTCGTGCTGCTACTGATAACTACGTGTCCAATAGTCTTGCTGCCGCAGAGAATGTGAAATCCAGCAATGTAGCTAAGATTAAAGTCGTGGTTCGCAAGAGACCGCTTAATAAGAAGGAGACAGCAAAGCATGAGGAGGATATTATAGACACAGTTTCAAATTCTTTAACCGTGCACGAGACCAAACTTAAGGTTGATCTAACTCAATATGTCGAGAAGCATGAATTTGTTTTTGATGCTGTTTTGGATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACTGTGGAGCCCATAGTTCCAATAATATTTCAACGCACTAAGGCGACTTGCTTTGCATATGGCCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCTCTTAAAGCATCAAGGGACATCTTGAGATTGATGCATCATAACTACAGGAGTCAGGGATTTCAGTTGTTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTACGATCTCCTTAATGATCGAAAAAAACTGTGCATGAGGGAGGATGGTAAGCAACAAGTTTGCATTGTTGGTTTGCAAGAGTACCAAGTATCGGATGTAGAGACCATCAAGGAACTGATTGAGCAAGGAAATGCCACAAGAAGTACTGGCACCACAGGTGCAAATGAGGAGTCTTCACGGTCACATGCAATTCTTCAGCTTGCTATCAAGAGATCTGTTGATGGAAATGTATCCAAGCCTCCTCGTGTTGTTGGGAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTGCTCGCCTTAAAGGAATGCATAAGAGCTCTAGATAATGACCAAGGACACATCCCATTCAGAGGCAGTAAATTGACTGAAGTTCTGAGGGATTCATTTGTTGGTGATTCTCGCACTGTTATGATATCATGCATATCACCAAGTTCCGGTTCTTGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCTTATCAAAAGGAAACAATTCTAAGAAGGACGTATTGTCTTCAAATTTGAACCTCAAAGAATCAATTTCCATTCCCTTGTCTTCTGTTAACACATATGCCTACGAGGATCGCGCAACTGATACATGGCCTGAAGAAAAAGACGGGGATGAGTTTAGTCCTCCTGAAGATTACTATGAACAGGTGAAACCATCATGGAAGAAAAATGGAAAAATAGAGCTATATGGTGCAACAGATGACAAATTTAAGAAACCCCCTAATGGCCAGATTAAATGGAAGGACATCCCAAAAGTTGAATCTAAACCAGTACAGTCAGATGATGGTTTAAATGCCCTCTTACAGGAAGAAGAAGACCTTGTAAATGCTCACCGGAAACAAGTGGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGACAAACCAGGTAATCAGCTGGATGATTATATAGCAAAACTAAATGCCATTCTGTCTCAGAAGGCAGCTGGCATCATGCAGTTACAAACCCGTTTAACTCATTTCCAGAAACGTTTAAAGGAGCATAGCGTTTTGGCTTCATCCGCTGGTTACTAA 2013 0.4322 MNRQGQRSGATGVHHNRQHSEHYLDASSKWFNSSSNHIPPLQDYNSYGGGGRMYRNNVQKSFSEYCMDPLTPPRSYTVKKNGDEDDSPRDFSPGLLDLHSFDTELLPQIPSSNAYDFEPYIFGKQTGRARAATDNYVSNSLAAAENVKSSNVAKIKVVVRKRPLNKKETAKHEEDIIDTVSNSLTVHETKLKVDLTQYVEKHEFVFDAVLDEEVTNDEVYRETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHNYRSQGFQLFVSFFEIYGGKLYDLLNDRKKLCMREDGKQQVCIVGLQEYQVSDVETIKELIEQGNATRSTGTTGANEESSRSHAILQLAIKRSVDGNVSKPPRVVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNLNLKESISIPLSSVNTYAYEDRATDTWPEEKDGDEFSPPEDYYEQVKPSWKKNGKIELYGATDDKFKKPPNGQIKWKDIPKVESKPVQSDDGLNALLQEEEDLVNAHRKQVEETMNIVREEMNLLVEADKPGNQLDDYIAKLNAILSQKAAGIMQLQTRLTHFQKRLKEHSVLASSAGY* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1555 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 477 IPR027417 -
Pvu10g1555 670 Coils Coil 588 619 - -
Pvu10g1555 670 Gene3D Kinesin motor domain 130 480 IPR036961 -
Pvu10g1555 670 ProSiteProfiles Kinesin motor domain profile. 154 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 CDD KISc_KIF2_like 154 475 - -
Pvu10g1555 670 Pfam Kinesin motor domain 160 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 PANTHER KINESIN-RELATED PROTEIN 6 1 670 - -
Pvu10g1555 670 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 670 - -
Pvu10g1555 670 ProSitePatterns Kinesin motor domain signature. 376 387 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu10g1555 670 PRINTS Kinesin heavy chain signature 234 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 PRINTS Kinesin heavy chain signature 343 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 PRINTS Kinesin heavy chain signature 377 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 PRINTS Kinesin heavy chain signature 427 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu10g1555 670 SMART kinesin_4 152 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1555 Pvu-Chr10 41994281 41998875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1555 153 477 Calmodulin-binding Proteins AT5G65930 34.328 3.81e-46 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1555 K10393 - gmx:100802651 1223.76