Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1551 ATGTCGTCTCCGTCGCCGGCGGAGACTCCTTCCGACGTTAACTCCACTGCCTCTCCTCCTCCTCCGGATGAAACACCTCTCGTACCTAACGCAACTGTATCCCCTCCTCCGCCTCCCGACACCACCAACGCCACCGTTACTCCTCCTCCGCCGTCAGCCCCAGCTCCGACTGGTTCCGGGTTGTCGCCGGGTACATTAAGTGGGATAATTATAGGGGCCGTGTTAGGTGCAGTAGGTATGCTTATTGTTGGGGGAATTTTCTTTTGCGTCTATAGGAATTGGAAAAAGAAGAGAAGCCAGAACAGCTACTCTCAACCGTCACAGCCGAAAGCTGACATGGCTGGTGGTGGCAACCTTCAGCATTGGCAAGGCAGTGTTTCTCCAACCACAGATGGTAAAGTGGGCTTGCCGCCCAAGCCTAGTCCTGGGGGTTTAGTGAACCATAAACTGTCATCCGCTGGTCTCCCCACACCAACTGTCAATTCTTCAGGCACTGGCAGTAGTTTGGGGTCCGAGAAGGTGCAGCCTTCACCTGGCATTTCCTTGGCGCTATCATCTCAAAGCACTTTTACACACGATGAGTTAGCTATGGCAACGGATGGATTCTCCAACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTCCACAAAGGACTTCTCCCAAATGGGAAAATTGTTGCAGTCAAGCAGTTGAAATCTGAGAGTAGACAAGGGGAGCGTGAGTTCCATGCAGAGGTCGAGGTCATTAGCCGTGTCCATCACAGACACCTCGTTTCCCTTGTTGGTTACTGCATATCAGACAACCAGAAAATGCTTGTCTACGAGTATGTGCCAAATGATACTCTAGAATTTCATTTGCATGGAAAGGACAGGCCATCAATGGACTGGTCGACAAGGATGAAGATTGCTATAGGATCTGCAAAAGGATTGGCATACCTGCACGAGGACTGTAATCCCAAAATCATACACCGAGACATCAAGGCATCTAACATTCTTATTGATGATAGTTTTGAGGCTAAGGTTGCCGATTTTGGACTTGCAAAGTTTTCATCAGACACAGAAACCCATGTTTCTACTCGAGTGATGGGAACTTTTGGATACATGGCTCCAGAATATGCTGCTAGTGGAAAACTAACTGAAAAGTCAGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATCACTGGACGGAAACCCGTTGATAAAAGTCATCCCTTCTTAGATGACAGCATGGTTGAATGGGCCAGGCCTTTACTGTCTCAAGCTTTTGAGAATGGCAACTTTGATGGACTTGTTGATCCAAAGTTGCAGAGAAATTACAATCACGATGAGATGATTCGAATGACTGCTTGTGCTGCAAGTTGTGTGCGCCATTCAGCCAGGCTACGACCTCGAATGAGCCAGGTTGTTCGAGCTCTGGAAGGAAATATTTCTCTAGAAGATCTAAACGAGGGGAGCGCACCTGGACACAGCAGAGTTTTTGGTTCCTTTGAGAGTTCTAGCTATGATAGTGTCCAATACAGTGAAGACATGAAGAACTTCAGGAAGCTGGCACTGGAAAGCCAAGAGCAAGGTATTAGTGAGTACAGTGGTCCCAGCAGTGATTACGGTCGACATCCATCTGTCTCTACCAGTTCGGGACAGCAAAATACGCAGGAAATTGAATTGGGGGAACGTGCAGGGCAGCAACCGTGA 1701 0.4815 MSSPSPAETPSDVNSTASPPPPDETPLVPNATVSPPPPPDTTNATVTPPPPSAPAPTGSGLSPGTLSGIIIGAVLGAVGMLIVGGIFFCVYRNWKKKRSQNSYSQPSQPKADMAGGGNLQHWQGSVSPTTDGKVGLPPKPSPGGLVNHKLSSAGLPTPTVNSSGTGSSLGSEKVQPSPGISLALSSQSTFTHDELAMATDGFSNSNLLGQGGFGYVHKGLLPNGKIVAVKQLKSESRQGEREFHAEVEVISRVHHRHLVSLVGYCISDNQKMLVYEYVPNDTLEFHLHGKDRPSMDWSTRMKIAIGSAKGLAYLHEDCNPKIIHRDIKASNILIDDSFEAKVADFGLAKFSSDTETHVSTRVMGTFGYMAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVDKSHPFLDDSMVEWARPLLSQAFENGNFDGLVDPKLQRNYNHDEMIRMTACAASCVRHSARLRPRMSQVVRALEGNISLEDLNEGSAPGHSRVFGSFESSSYDSVQYSEDMKNFRKLALESQEQGISEYSGPSSDYGRHPSVSTSSGQQNTQEIELGERAGQQP* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1551 566 MobiDBLite consensus disorder prediction 521 566 - -
Pvu10g1551 566 Gene3D Transferase(Phosphotransferase) domain 1 278 487 - -
Pvu10g1551 566 Pfam Protein tyrosine and serine/threonine kinase 205 475 IPR001245 GO:0004672|GO:0006468
Pvu10g1551 566 SMART serkin_6 202 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1551 566 ProSiteProfiles Protein kinase domain profile. 202 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1551 566 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 548 - -
Pvu10g1551 566 MobiDBLite consensus disorder prediction 152 178 - -
Pvu10g1551 566 MobiDBLite consensus disorder prediction 1 60 - -
Pvu10g1551 566 Gene3D Phosphorylase Kinase; domain 1 167 277 - -
Pvu10g1551 566 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 548 - -
Pvu10g1551 566 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
Pvu10g1551 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Pvu10g1551 566 SUPERFAMILY Protein kinase-like (PK-like) 177 475 IPR011009 -
Pvu10g1551 566 MobiDBLite consensus disorder prediction 525 566 - -
Pvu10g1551 566 MobiDBLite consensus disorder prediction 98 178 - -
Pvu10g1551 566 MobiDBLite consensus disorder prediction 15 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1551 Pvu-Chr10 41962607 41967396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1551 30 549 Trihelix Transcription Factor Family AT1G70460 49.721 7.61e-160 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu10g1551 PK_Tyr_Ser-Thr 5.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1551 - - ccaj:109808169 862.062