Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1541 ATGAGTCGCTCATTGAAAGCTTTCAACAAACACCTCTCTCTCCTTCCGCTACCTCTACACCTACGCAATTTTTCTACCCATCCCTTCATAACTTCCTCTTCTTTCCCTCTTTTCCCACATCACGTTTCCTTCCCCAGGTTCTCTTTCTCTAAGCTTCATCCACTTTCGTCATCTGCACCTGCTACATTAATGGAGGTGGTAAAAGCAATTGCTAAGCAAGAACCTACAGCTCATGAAAATGTTGCTATCAGGGCTGATCAGAAGAGTTATAGTTACAAGGAACTCATCTCATCAGCACAGAAGATATCTAATCTCTTGTGTGCCAGTGATGCACAAACAGGAAGTCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAATTTGTTGCTGGAATAATTGGGATTTGGCTCAGTGGAGGTGTTGCTGTTCCCCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTGATAATTCGGATATATCTGCAATACTGAGTACTGAAGAGCATAGTGAATTAATGCAAACCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCATCTGTTGTCAACACGTCTTCAGAGAAAAGCAGAGATGAACGCCAACAGAATGGGAAAATTCATGCAGACAGGATTTTGTTGGATAATATTATCGGAGGATCAGGTGAAGAAGATCCAGCACTGATTTTGTACACCAGTGGGACTACCGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATAATTTCCCAGGTCCAAACTTTGGCAAAAGCATGGGAATACACGGCTGCTGACAAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATACAGGTTCCTCGGTTGAGTTTTTGCCAAAATTTAGTGTGAGGGGAGTTTGGCAGAGATGGCGTGAATCATATCCAACTGATGGTTCTAAGGCCGACGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATAATGCAATGGATCCTGAGCTTCAACATGTTTCAGCGTCTGCTGCAAATAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCAAATCCATTGAAAGGTGAGCGCAAGCCAGGAACCGTGGGCAAACCATTTCCCGGTATACAGGTAAAGATTATTGCAGATGAAGAGAATGAGAATGACTATAATAATGGAATGGGTGAGCTTTGCGTTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTACATCATTTTAGGACGTACTAATGCTGATATAATCAAAGCTGGTGGCTATAAGCTCTCTGCATTAGAAATTGAATCAGTTATCATAGAGCATCCAGCTGTCTCAGAATGTGTCATTTTAGGATTACCAGACAAAGACTATGGAGAGATTGTAGGTGCACTCATTGTGCCACATGCTGATGTTAAAGCAAAGCGAGATCAAGAATCAAAGCCTGTTCTAACCCTAGAAGAATTATCCACCTGGGCCAAAGAAAAAATTGCACCTTATAAGATTCCAACTAAACTAATTCTGTGGGAGAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAGGAGCTGAAGAAACTGGTGGTTTCAGAACAATGA 1830 0.4191 MSRSLKAFNKHLSLLPLPLHLRNFSTHPFITSSSFPLFPHHVSFPRFSFSKLHPLSSSAPATLMEVVKAIAKQEPTAHENVAIRADQKSYSYKELISSAQKISNLLCASDAQTGSLGGARIGIVAKPSAEFVAGIIGIWLSGGVAVPLATSYPEVELLYVIDNSDISAILSTEEHSELMQTVANKSSSQFFHLPSVVNTSSEKSRDERQQNGKIHADRILLDNIIGGSGEEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLAKAWEYTAADKFLHCLPLHHVHGFFNGLMAPLYTGSSVEFLPKFSVRGVWQRWRESYPTDGSKADDAITVFTGVPTIYARLIQGYNAMDPELQHVSASAANNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEENENDYNNGMGELCVKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECVILGLPDKDYGEIVGALIVPHADVKAKRDQESKPVLTLEELSTWAKEKIAPYKIPTKLILWEKLPRNAMGKVNKKELKKLVVSEQ* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1541 609 ProSitePatterns Putative AMP-binding domain signature. 236 247 IPR020845 -
Pvu10g1541 609 SUPERFAMILY Acetyl-CoA synthetase-like 59 606 - -
Pvu10g1541 609 CDD MCS 81 603 - -
Pvu10g1541 609 PANTHER MALONATE--COA LIGASE-LIKE 40 605 - -
Pvu10g1541 609 Pfam AMP-binding enzyme C-terminal domain 510 595 IPR025110 -
Pvu10g1541 609 Gene3D - 496 608 IPR045851 -
Pvu10g1541 609 PANTHER ACYL-COA SYNTHETASE 40 605 - -
Pvu10g1541 609 Pfam AMP-binding enzyme 77 499 IPR000873 -
Pvu10g1541 609 Gene3D - 66 493 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1541 Pvu-Chr10 41896617 41903193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1541 230 605 Monolignol Biosynthesis Gene Families AT4G19010 27.390 3.25e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1541 K18660 - gmx:100813324 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1541 10 41896617 41903193 Pvu10g1541 10 41896617 41903193 ECH