Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1516 ATGCCGGTGATTCGTAACGGAGCGAGCAGGGGCCGGGGAGCAGCGAAACAGCAGGAGCGGCAGCAGGGTCCAGCGGCGGAAGGGGAGGCGATTGCGACGAGGACCCGGAGGCGGCGTGCGGCGGCGGCGGCGGCAGCAGTGCCGAAGAGTAACAACAACAACGACGAAAATAATAAGTGCAAGCAGCAACAGCAGCACCAGCCGGAGCAGGTGGTGGTGGTAAATGAGAACGTAGTTGTTGCGGCGAAGGAAGAAGAGAATCGGGGATTGGGGGAAGGTGTTGGCGCGGGTGGAGCGGAGAGGGAAGAGGTAGGCGAGAAAGAGATGGTTGGATATAACAGTGGAGGTCGGAGCAATGATAAAGCCAATGCCGGTCCTGAAGATGACGCCAATACTCCCGAGGTTCCTCAGAAGATTCAAGTAGGTAATTCCCCTTGTTATAAAGTAGAAAGAAAACTTGGTAAGGGTGGATTTGGTCAGGTATATGTTGGACGACGTTGTAGTGGAAATTTGAATGAGAGAACTGGACCTGGAGCTGTCGAGGTTGCATTAAAACTTGAGCATAGAACTAGTAAAGGATGTACTTATGGACCACCCTACGAGTGGCAAGTGTACAACACTCTCGGTGGCAGTCATGGTGTGCCTCATGTACACTACAAGGGAAGGCAGGGCGACTATTATGTCATGGTTATGGATATACTGGGACCTAGCCTGTGGGATGTTTGGAATAATAATAACTCTCATGCCATGTCCACGGAAATGGTTGCTTGCATTGCCATTGAAGCAATATCTATATTGGAAAAAATGCACTCTCGAGGATATGTGCACGGAGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACGTCTGATGAGAAAAAATTGTTCCTTGTAGATCTTGGATTAGCTACTAAGTGGAGGGATAGTACAACAGGCTCACATGTGGAATATGATCAAAGACCAGATGTTTTTAGAGGCACAGTCCGCTATGCTAGTGTTCATGCACATTTAGGTAGAACTGCAAGCAGGAGGGATGACTTGGAATCTCTTGCATATACATTGATTTTCCTTCTCCGAGGTCGCCTTCCTTGGCAAGGATTCCAGGGAGAAAACAAAGGTTTCCTAGTTTGCAAGAAGAAGATGGGAACATCTCCAGAGATTATTTGCTGCTTTTGTCCCCAACCTTTTAAGCTGTTTGTTGAACATGTTGTGAACTTAAAGTTTGATGAAGAACCCAATTATGCAAAATACATTTCTTTATTTGATGGGATTGTTGGTCCTAACCCAGATATTAGACCAATTAATACAGAAGGTGCACAAAAGCTCATTGGTCATAAGAGAGGCCGATTAGCCATGGAAGAAGAGGACGATGACCAGCCAAAAAAGAAGATTCGTATAGGTTTGCCAGCATCCCAGTGGATAAGTGTTTACAACGCTCGTAGACCAATGAAACAAAGATATCACTACAATGTATCAGATACAAGGTTATCCCAGCACATTGAGAAAGGAAACGAGGATGGGTTATATATTAGCAGTGTTGCTTCATCTCAGAACGTATGGGCATTAATCATGGATGCAGGGACAGGTTTCGCTGGCCAAGTTTACGAACTCTCACCCTTCTTTCTCCATAAGGAATGGATTGTGGAGCAATGGGAACTAGGTTACTACATCAGCGCAATTGCTGGAGCTGCAAATGGGAGCTCGCTAGTAGTAATGTCCAAGGGCACACAGTTTGTGCAACAATCATACAAAGTGAGTGATTCATTTCCTTTTAAGTGGATTAACAAAAAGTGGAGGGAGGGGTTTTACGTGACTTCAATGGCCACTTCAGGGCCCAGATGGGGAGTCGTCATGTCTCGTGGTGCAGGATATTCAGACCAGGTTATTGAACTAGACTTTCTGTATCCTAGTGAGGGGATTCACAAGCGGTGGGATAGCGGTTACAGAATCACATCTACTGCTGCAACTTGGGACCAAGCTGCTTTTGTCCTCAGCGTCCCAAGGAGGAAGCCTGTAGATGAAACCCAGGAAACACTTAGGACTTCTGCTTTTCCCAGTACACATGTCAAGGAGAAGTGGGCTAAGAACCTCTACATTGCTTCTATTTGCTACGGACGTACAGTTTCTTGA 2136 0.4663 MPVIRNGASRGRGAAKQQERQQGPAAEGEAIATRTRRRRAAAAAAAVPKSNNNNDENNKCKQQQQHQPEQVVVVNENVVVAAKEEENRGLGEGVGAGGAEREEVGEKEMVGYNSGGRSNDKANAGPEDDANTPEVPQKIQVGNSPCYKVERKLGKGGFGQVYVGRRCSGNLNERTGPGAVEVALKLEHRTSKGCTYGPPYEWQVYNTLGGSHGVPHVHYKGRQGDYYVMVMDILGPSLWDVWNNNNSHAMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTSDEKKLFLVDLGLATKWRDSTTGSHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMGTSPEIICCFCPQPFKLFVEHVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDDQPKKKIRIGLPASQWISVYNARRPMKQRYHYNVSDTRLSQHIEKGNEDGLYISSVASSQNVWALIMDAGTGFAGQVYELSPFFLHKEWIVEQWELGYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTSMATSGPRWGVVMSRGAGYSDQVIELDFLYPSEGIHKRWDSGYRITSTAATWDQAAFVLSVPRRKPVDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1516 711 MobiDBLite consensus disorder prediction 1 72 - -
Pvu10g1516 711 ProSiteProfiles Protein kinase domain profile. 147 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1516 711 ProSitePatterns Protein kinases ATP-binding region signature. 153 185 IPR017441 GO:0005524
Pvu10g1516 711 MobiDBLite consensus disorder prediction 47 72 - -
Pvu10g1516 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Pvu10g1516 711 Gene3D Transferase(Phosphotransferase) domain 1 113 466 - -
Pvu10g1516 711 PANTHER CASEIN KINASE-RELATED 108 684 - -
Pvu10g1516 711 Pfam Protein kinase domain 147 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1516 711 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 108 684 - -
Pvu10g1516 711 SMART serkin_6 147 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1516 711 SUPERFAMILY Protein kinase-like (PK-like) 146 427 IPR011009 -
Pvu10g1516 711 MobiDBLite consensus disorder prediction 84 141 - -
Pvu10g1516 711 CDD STKc_CK1 147 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1516 Pvu-Chr10 41707623 41713365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1516 228 423 MAP Kinase Kinase Kinase AT5G50180 24.121 1.53e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pvu10g1516 Pkinase 8.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1516 - - gmx:100799630 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1516 10 41707623 41713365 Pvu10g1516 10 41707623 41713365 ECH