Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1512 ATGTTCTCCTCCAATGCACACTCCTTCATGTTTTCGTGTGAACTTTACCCGCAGTGCAAGTCGGGCATAGGTGGGTGGTCTTCGGGTAGTGACTTCTCAGCTTCACAGAGGAGGCGTTCTGCTCCATCGAGAGTGACGTGTTGTGCTTCAACTTCGAGCAGCGGCAAAACTCACGGCGGCTTTTTGATGGAGGAAGAGGCCAGTGGGACTTCCACAATCGCCGGCGGCGGCGTCCGGGACGTGTACGGCGAGGATAGAGCTACTGAGGATCAGGGTGTGACTCCGTGGAATGTCTCTGTTTCTTGTGGGTATACTTTGTTGAGAGATCCTCACTTCAACAAAGGACTCGCCTTCAATGATAAAGAGAGGGACTCCCACTACTTGCGTGGCCTTATTCCCCCATCTGTTCTTTCTCAAGAAACTCAGGTAAAGAAAATGATCCAACACATACGCCAGTATGAAGTTCCATTGCACAAGTTCGTGGCAATGATGGATCTTCAGGGGAGAAATGAAAGATTGTTCTACAGGCTTCTGCTTGATCATGTTGAGGAGTTACTACCAGTTGTCTATACTCCAACAGTTGGTGAAGCATGCCAGAAATATGGGAATATCTTCATGAGTCCTCAGGGACTTTATATAAGTTTGAAGGATAAAGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAGGAACATTCAAGTCATTGTTGTAACTGATGGAGAGAGAATTCTGGGCCTTGGGGATCTTGGTTGTCAGGGAATGGGAATACCGGTTGGAAAACTCTCTTTATATACAGCACTTGGTGGAGTTCGTCCTTCTTCTTGCTTGCCTATTACCATCGATGTGGGTACAAACAATGAGAATTTGTTGAATGAAGAATTCTATATAGGACTCAGGCAGAAACGGGCAACTGGGCAGGAATATGCTGATCTTCTGCAAGAATTTATGAATGCAGTCAAGCAGAATTATGGTGAAAAAATCCTTGTTCAGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTACTTGAAAAATATAGGTCAACACATCTTGTCTTTAATGATGATATTCAGGGAACAGCATCAGTGGTTCTTGCAGGACTAATTGCTGCTCTGAAATTGGTTGGGGGAGACTTGCCTGATCACAAGTTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACTTCAAAACGGACAAATCTCCCAGTAGAAGAAATGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTGGATTCCCGCAAAGAATCACTTCAACATTTTAAGAAACCCTGGGCTCATGAACATGAACCTGTTGAGGAACTTGTAGATGCTATTAATGATATTAAGCCAACAGTTTTAATTGGAACATCAGGACGAGGAAGAACTTTTACCAAGGAAGTGATTGAAGCTATGGCTTCCTTGAATGAGAAACCTATTATTCTTTCCCTTTCCAATCCCACATCACAGTCAGAATGCACTGCTGAAGAAGCTTACACTTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGGAGCCCTTTTGACCCAGTTGAATATGATGGAAAAGTGTTTATGCCTGGCCAGTCCAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGAACCATTCGTGTCCATGATGACCTGCTTCTGGCAGCTGCTCAAGCTTTGGCTTCACAGGTGGCTGAGGAGGACTATGACAAGGGGCTCATATACCCTCCTTTCTCCAACATCAGAAAGATTTCAGCACATATAGCTGCCAAAGTGGCTGCTAAGGCCTATGAACTTGGCTTGGCCACTAACATTCCTCAGCCAAAAGATTTGATGAAGTTTGCTGAGAGCTCTATGTATACACCAGCCTATAGAGACTACCGGTGA 1929 0.4469 MFSSNAHSFMFSCELYPQCKSGIGGWSSGSDFSASQRRRSAPSRVTCCASTSSSGKTHGGFLMEEEASGTSTIAGGGVRDVYGEDRATEDQGVTPWNVSVSCGYTLLRDPHFNKGLAFNDKERDSHYLRGLIPPSVLSQETQVKKMIQHIRQYEVPLHKFVAMMDLQGRNERLFYRLLLDHVEELLPVVYTPTVGEACQKYGNIFMSPQGLYISLKDKGRILEVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNENLLNEEFYIGLRQKRATGQEYADLLQEFMNAVKQNYGEKILVQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLIAALKLVGGDLPDHKFLFLGAGEAGTGIAELIALETSKRTNLPVEEMRKNIWLVDSKGLIVDSRKESLQHFKKPWAHEHEPVEELVDAINDIKPTVLIGTSGRGRTFTKEVIEAMASLNEKPIILSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPVEYDGKVFMPGQSNNAYIFPGFGLGLIMSGTIRVHDDLLLAAAQALASQVAEEDYDKGLIYPPFSNIRKISAHIAAKVAAKAYELGLATNIPQPKDLMKFAESSMYTPAYRDYR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1512 642 Pfam Malic enzyme, NAD binding domain 358 610 IPR012302 GO:0051287
Pvu10g1512 642 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 358 641 IPR036291 -
Pvu10g1512 642 SMART Malic_M_2 358 611 IPR012302 GO:0051287
Pvu10g1512 642 PIRSF ME 65 642 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 173 197 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 233 262 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 269 291 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 329 347 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 354 370 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 385 401 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 PRINTS Malic enzyme signature 488 504 IPR001891 GO:0004470|GO:0004471
Pvu10g1512 642 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 85 357 IPR046346 -
Pvu10g1512 642 PANTHER MALIC ENZYME-RELATED 74 642 - -
Pvu10g1512 642 CDD NAD_bind_1_malic_enz 358 636 - -
Pvu10g1512 642 Gene3D - 101 355 IPR037062 GO:0004471
Pvu10g1512 642 Gene3D - 356 642 - -
Pvu10g1512 642 SMART malic_2 167 348 IPR012301 GO:0004471
Pvu10g1512 642 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 74 642 - -
Pvu10g1512 642 ProSitePatterns Malic enzymes signature. 354 370 IPR015884 GO:0004471
Pvu10g1512 642 Pfam Malic enzyme, N-terminal domain 167 348 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1512 Pvu-Chr10 41665877 41671047 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1512 K00029 - gmx:100785718 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1512 10 41665877 41671047 Pvu10g1512 10 41665877 41671047 ECH
Pvu10g1512 10 41665877 41671047 Pvu5g1717 5 39126159 39131844 ECH
Pvu2g3184 2 47120072 47126513 Pvu10g1512 10 41665877 41671047 ECH
Pvu9g1143 9 16740222 16745122 Pvu10g1512 10 41665877 41671047 ECH
Pvu10g1512 10 41665877 41671047 Pvu9g1143 9 16740222 16745122 ECH
Pvu10g1512 10 41665877 41671047 Pvu4g1125 4 34620507 34622280 ECH
Pvu10g1512 10 41665877 41671047 Pvu7g0770 7 6907213 6908842 ECH
Pvu10g1512 10 41665877 41671047 Pvu10g1086 10 36231937 36233733 ECH
Pvu10g1512 10 41665877 41671047 Pvu8g0593 8 5181941 5183860 ECH
Pvu5g1717 5 39126159 39131844 Pvu10g1512 10 41665877 41671047 PCT