Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1508 ATGATGATTCTGGTGAGAAAACCCCATTGGGGGTTGCTTCTTTTTCTTCTCCACCTTCACTGCCGCACCTGTCACTCTACAGAACCTATGAACTGTACGGACACAAGCCGCGTTTGCACTTCTTTCATGGCCTTCAAACCTGGACCGAACCAAACGCTTCCTCTGATTCAGAGCATGTTTGATGTGCTGCCTGGTGACATCACAGTTGAAGGCAACGGGTGGGGTTACATGTTCATAAGGAAGAATTGTTCTTGTGCTACGGGTATCAAGGAATACTTGTCCAACACCACCTTCACTGTGAAATCCAATGAGGGGTTGGTGTATGACGTGGTGATGAATGCCTATGATGGCCTTGCTTTCCTTCCCAACACCACCAGGAGGGCCAGGAATGGTGCTGTTGTGTCTCTGAGGTTGTTTTGTGGATGCTCCAGTGGACTGTGGAACTATTTGGTCAGTTATGTGATGAGAGATGGGGATAGTGTTGAGTCCTTGGCAAGCAGGTTTGGGGTTAGCATGGATAGCATCGAGAGTGTGAATGGCATTAGTAATCTGGATAATGTCACAGTTGGTTCACTTTATTATATACCACTTGATTCTGTTCCTGGTGATCCTTATCCCCTGAATAATGCTGCTCCACCAGTTCCTGTTCCTGCCCCATCCTTTGATAATTTTTCAGCTGATCAAGTCAACCACAAGACTCATGTACCCTACGGATGGATCGTTGGGGGCTTAGGAATTGGTCTACTTCTAATTATATTAACTGTGATTCTCTGTGTTTGTATGAGATCATCAAATTGTTTTGCTGATGATGCCAGAACTCATGAGAAAGATGCTGAGGGCAAGATTTCTCATAAATTCCACATTCTAAGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAGCATGTTGAGCAGAAGCAAACAGATGCTGAATCCAGCAATCACACGGTTACCATTCCAAAAGCCTCAACTCTTGGGCCTGATGTATTTGAAATGGATAAGCCTGTTATTTTTACATATGAAGAGATTTTCTCCACATCTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTTCGTGATCAGGAAGTTGCTATTAAAAGAATGACTGCTACTAAAACAAAAGAATTTTTGTCAGAGATGAAAGTTTTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCACGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTTAGAAGCCATTTGCATGATCCTAATAGTAAGGGTCATTCCCCACTTTCTTGGATCATGAGGGTGCAGATTACGCTTGATGCTGCTAGGGGCCTCGAATACATACACGAGCACACAAAAACTCATTATGTACACCGTGATATCAAAACCAGTAACATATTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTCGGGTTAGCAAAACTTGTTGGGAAAACAAATGAGGGAGAAATATCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCCCCAGAATATTTGAGTGAGGGTCTTGCGACAGCTAAAAGTGATGTCTATGCATTTGGGGTTGTCCTTTTCGAGATTATATCAGGAAAGGAGGCCATCATTAGATCAGAAGGCACAACGACAAAAAATCCTGAAAGACGTTCTCTGGCTTCTATAATGCTGGGAGTTCTTAGGAATTCACCTGATTCCATGAGCATGTCAAGCTTGAGAGATTATATTGATCCAAATATGATGGATTTGTATCCCCATGATTGTGTATTTAAGATGGCCACACTGGCAAAGCAATGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATTTCCCTCTCACAGATTCTCCTTTCTTCTGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 1995 0.4266 MMILVRKPHWGLLLFLLHLHCRTCHSTEPMNCTDTSRVCTSFMAFKPGPNQTLPLIQSMFDVLPGDITVEGNGWGYMFIRKNCSCATGIKEYLSNTTFTVKSNEGLVYDVVMNAYDGLAFLPNTTRRARNGAVVSLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIESVNGISNLDNVTVGSLYYIPLDSVPGDPYPLNNAAPPVPVPAPSFDNFSADQVNHKTHVPYGWIVGGLGIGLLLIILTVILCVCMRSSNCFADDARTHEKDAEGKISHKFHILRNPSFFCGSGRYICGKHVEQKQTDAESSNHTVTIPKASTLGPDVFEMDKPVIFTYEEIFSTSDGFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFLSEMKVLCKVHHANLVELIGYAASHEELFLVYEYAQKGSLRSHLHDPNSKGHSPLSWIMRVQITLDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKTNEGEISTTKVVGTYGYLAPEYLSEGLATAKSDVYAFGVVLFEIISGKEAIIRSEGTTTKNPERRSLASIMLGVLRNSPDSMSMSSLRDYIDPNMMDLYPHDCVFKMATLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1508 664 PANTHER BNAA06G02020D PROTEIN 30 664 - -
Pvu10g1508 664 ProSiteProfiles Protein kinase domain profile. 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1508 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Pvu10g1508 664 Pfam Protein tyrosine and serine/threonine kinase 358 634 IPR001245 GO:0004672|GO:0006468
Pvu10g1508 664 SUPERFAMILY Protein kinase-like (PK-like) 332 636 IPR011009 -
Pvu10g1508 664 Gene3D LysM domain 148 201 IPR036779 -
Pvu10g1508 664 ProSiteProfiles LysM domain profile. 151 195 IPR018392 -
Pvu10g1508 664 Gene3D Phosphorylase Kinase; domain 1 330 425 - -
Pvu10g1508 664 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Pvu10g1508 664 Gene3D Transferase(Phosphotransferase) domain 1 427 651 - -
Pvu10g1508 664 CDD LysM 151 195 IPR018392 -
Pvu10g1508 664 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 30 664 IPR044812 GO:0019199|GO:0045087
Pvu10g1508 664 SUPERFAMILY LysM domain 151 196 IPR036779 -
Pvu10g1508 664 SMART LysM_2 152 196 IPR018392 -
Pvu10g1508 664 Pfam LysM domain 153 190 IPR018392 -
Pvu10g1508 664 SMART serkin_6 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1508 Pvu-Chr10 41637660 41643876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1508 28 664 Receptor kinase-like Gene Family AT1G51940 69.767 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu10g1508 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1508 - - gmx:100796989 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1712 5 39083400 39088302 Pvu10g1508 10 41637660 41643876 PCT