Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1504 ATGGGAAAAGCTAGCAGGTGGTTGAAGGGTTTGTTGGGGATGAAGAAGGAGAAGGACCACAGCGACAATTCAGGCTCACTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCTAAGCCAGGGAAGGATGTGCCATCTTCAGTTCCTGCCACAGATAACACCTGGCTCAGATCCTACTTTGATGATACAGAGACTGAGCAGAATAAGCATGCAATTGCTGTTGCCGCCGCCACTGCGGCTGCCGCCGATGCTGCCATGGTTGCCGCACAGGCTGCCGTGGCGGTTGTGAGGCTGACAAGCCAGGGGAGAGGTGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTACTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTCAGATCACAACGAGCTCGTCGTTCCTTGAGCAAAGAAAGCAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGTTGCCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGTCCCAAGATTGTTGAAATTGATACATACAAGACTCGATCAAGGTCTAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTCTCAGGCAATGTCGTCCCCTCTTCCTTGTCATGTCCCTGGTCGAATCTCGGTTCCTGAATGCAGACACCTTCAAGATTTTGATTGGTACCTCAATGTTGATGAGTGTAGATTCTCCACTGCTCATAGCACACCACGTTTCACAAACTATGCCCGACCTAATGCTCCAGCTACACCAGCTAAGAGTGTTTGTGGAGATACCTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGACCAATACTCAGTCATTCAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAACAAAGACCTGAACCCAAGAAAAGACTCTCACTGAATGAAGTCATGGCTGCAAGAAACAGCATAAGTAGTGTTAGAATGCAAAGGCCATCATCAAATTTCTTCCAGACTCAAGAATCCTGGAATTTTTGA 1188 0.4663 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVPSSVPATDNTWLRSYFDDTETEQNKHAIAVAAATAAAADAAMVAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRSQRARRSLSKESRFLPEVLARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSSQAMSSPLPCHVPGRISVPECRHLQDFDWYLNVDECRFSTAHSTPRFTNYARPNAPATPAKSVCGDTFFRPCSNFPNYMTNTQSFKAKLRSHSAPKQRPEPKKRLSLNEVMAARNSISSVRMQRPSSNFFQTQESWNF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1504 395 MobiDBLite consensus disorder prediction 10 41 - -
Pvu10g1504 395 MobiDBLite consensus disorder prediction 1 51 - -
Pvu10g1504 395 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Pvu10g1504 395 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Pvu10g1504 395 Gene3D - 57 139 - -
Pvu10g1504 395 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Pvu10g1504 395 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 385 - -
Pvu10g1504 395 PANTHER IQ-DOMAIN 5-RELATED 1 385 - -
Pvu10g1504 395 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Pvu10g1504 395 SMART iq_5 113 135 IPR000048 GO:0005515
Pvu10g1504 395 SMART iq_5 136 157 IPR000048 GO:0005515
Pvu10g1504 395 Pfam Protein of unknown function (DUF4005) 302 377 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1504 Pvu-Chr10 41597488 41600506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1504 1 379 IQD Protein Family AT3G16490 54.962 1.16e-112 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1504 - - gmx:100797686 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1504 10 41597488 41600506 Pvu10g1504 10 41597488 41600506 ECH
Pvu5g1708 5 39043664 39046272 Pvu10g1504 10 41597488 41600506 PCT