Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1490 ATGGCGACGGCGCCGGGAAACCAAATGATGGAGGGAGGACCGCCGCCGCTACCGGGGACCGATATGACCGGGATATGCTTCCGAGACCAGCTCTGGCTGAACAGCTTCCCTCTCGATCGCAACCTTGTCTTCGATTACTTCGCGCTGTCACCTTTCTACGATTGGACTTGCAACAACGAGCAACTCCGTATGCGCTCCGTTCACCCCCTCGACCTCTCTCAACTCTCGAAAATGACGGGGACGGAGTATATGCTCAGCGAAGTTATGGAGCCGCACCTGTTTGTTATTCGCAAGCAGAAGAGAGATAGCCCCGACAAAGTTACGCCCATGCTCGCCTACTACGTCCTTGATGGTTCTATTTACCAGGCTCCGCAACTCTGCAATGTTTTTGCTGCCAGAATTGGAAGAGCCCTTTATTACATACAAAAGGCATTTACTACAGCTGCCTCAAAGTTGGAGAAGATTGGATATGTGGATTCTGAAAATGAGACTGCATTAGTGGAGTCAAAGACTGCTAAGGAGACCATTGATATAAAGGAAGTTAAGCGTGTGGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCTCCTCCACCACCATTTCCAGAAGGGTATGTGCCCCCTCCAACAGCTGAAGCTGAGAAAGGCACCGAAACTCAGGAAGCAGCAGAAACACAAGCTCCTACTGCTGATCCCATTATTGATCAAGGACCAGCAAAAAGAATGAAATTTTAA 744 0.4946 MATAPGNQMMEGGPPPLPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDLSQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADPIIDQGPAKRMKF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1490 247 Gene3D Mediator complex, subunit Med6 19 148 IPR038566 -
Pvu10g1490 247 MobiDBLite consensus disorder prediction 193 247 - -
Pvu10g1490 247 Pfam MED6 mediator sub complex component 25 150 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pvu10g1490 247 PANTHER MED-6-RELATED 14 247 IPR007018 GO:0003712|GO:0006357|GO:0016592
Pvu10g1490 247 MobiDBLite consensus disorder prediction 194 210 - -
Pvu10g1490 247 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 14 247 - -
Pvu10g1490 247 PIRSF MED6_meta/plant 12 247 IPR016820 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Pvu10g1490 Med6 9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1490 K15128 - gmx:100792248 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1490 10 41507802 41512159 Pvu10g1490 10 41507802 41512159 ECH