Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1488 ATGGTTAAACATTTTGTGTTGTTGTGTTTGACTCTTTCAGCTCTTATTCACGCCCAAGATCAATCAGAATTCATTAGCATTGATTGTGGAGTGGTGGATGAACCAAGCTACAAAGATGAAACTACAGGCATTGAATACAGTTCAGATGGAAATGCCACAGACACAGGTATAAACAGGAGAATATCATCTGAATACATGGTGAAATCCTTGGAGAGAAGGTTTTGGAATGTTAGAAGCTTCCCTGAAGGCACAAGAAACTGCTATACCCTTTATCTTCCTCGAATGAATAGCAACAAACGTGTGATTAGGGCAAGGTTCATGTATGGAAACTATGATGGAAAAGATTCCCTGCCCAAGTTTGATTTGTACCTTGGACCCAACTTCTGGGACTCTGTGGAGTTTGAAAATGCTTCCACTGTTACAACCATGGAAATTGTTCATGTTGCAACATCAGATTATATTCAAATTTGCCTTGTTAACACAGATGAAGGGACACCCTTCATATCAACCTTGGAGATCAGAGTTCTGAATGATGGTACCTATGTATCTGAGTCAATACAGCTTCTGGAAAGGTTTGATGTAGGCTTACAAGAGGGTCAAATTGTCAGGTACCCTGATGATATTTATGATCGAATCTGGTCACCCTACAATCCACATGGCTGGAAACAGATTAGTACAACCCTTGCCGTAGCTAATGGAGGACCTTTCTCTTATGGGGTACCCTCCACTGTCCTTAAAACAGCAGCAACACCAGAAAATGTCACTGATAATTTGGGATTTTCATATCAGCTAAGCAATGGTGCAGTCAGATTTTATGTATACATGTACTTTGCTGAGATAGAGAAGCTTGAAGCTGATCAAACTAGACAATTCGATGTTTTTGTGAATGGGGCACTCCTTCAGAATAATGCCACTTTACCTTTCCTGGGTCACGGTACTTTGATATATATATCCTCTGAACCCGAAACTGTGTTACAGATTTGGATCAACAGAACAAATAAAGCAACTATGTCCCCTATACTGAATGGCATTGAGCTTTATCAAGGGAAGACCCTAGATCTACCACAAACACATCAAAATGATGTTGGTGCCATCATGCAAATAAAGTCAACGTACAACATGAAGCAAATATGGCAAGGAGATCCTTGTAGCCCTAAAACTGAGATGTGGAAGGGTGTGAACTGCAGCTACAATGGACACAACCAACCTAGAATCACATCTTTGAACCTGTCCTCTAGTGGGTTGAATGGAAGCATAGTTGAGGCCATATCAAATCTGAAGTTAATACAATATTTAAATATAGGAGATAATAAACTATCAGGCTCAATTCCTTCAAAACTCTCTGAGAGAACAAGGAATGGGTCGCTGCTTATATTAATTGTTGGTGGAAATCCACATCTTTGCTTCTCAAGTCCTTGTCCCACTAGGAAGAAGATAGTAATTCCACTGGTAGTAACAGCTCTTGCAGCTCTCATCCTTTCAGCAACACTCTCCTTTGTTTATAGAAGAAGACTTCAAGTTGTCTTGAATAGGCACAAATTGAGTTGTTTCAACAAAACTGTGAGTGTGGACTCAAAGAAACAAGAGTTCACCTACTCAGAGGTTCGAAGTATTACCAATAATTTTGAGAGGGTTGTGGGTAAAGGAGGATTTGGAATTGTCTACCATGGTTGCATAGGTGAAACACAAGTAGCAGTGAAGATGCTCACTGCTTCAACTCAAGGGTATCAGCAATTTCAGACAGAGGCAAATATTCTCACAAGAGTACACCATAAATGCTTGACTCCACTTATTGGATATTACAATGAAGGCAATAGAACAGCACTCATATATGAATACATGACCAATGGAGACTTATCTGACAAACTATCTGGTGAAAGTCAAACGTTCTTAGATTGGAAACAGAGACTTCAAATTGCACTGGATGCTGCAGTAGGTTTGGAGTACCTTCATAATGGTTGCAAGCCCCCAATTGTTCACAGAGATGTTAAGACTAGAAACATTTTACTCAATGAAAATCTACGTGCTAAAATATCTGATTTTGGATTGTCAAGGATCTTTTCAGATGAAGGTGACACTCATGTATCAACAGTTATTGCAGGCACCCCAGGATACCTTGACCCTGAATACTACATAACAAACAGGTTGAATGAAAAAAGTGACGTCTTTAGTTTTGGAGTTGTTCTCCTAGAGATAATCACAGGGCGAAAAGCCATATTGAAAAGCAGTGTGAAAACTCACATAATCAAATGGGTGAGTTCCATTCTGGAAGATGATGGTGAAATTGATGGTATTATGGATCCAAGGTTACAAGGAGATTATGACAGTGATGCTGCAAGGAAAGTAGTAGATGTAGCAATGGTTTGTGTAGCTCCAAGTTCTGTTAATAGGCCATCAATTAGTCAAGTGGCTATGGAACTAAAACTATGTTTTCCCATAGCAGAACTTAGGAGTGCGTCTAGTGGATCCATTGAAATTGCCTCCATAAATGAAATCAGTGGATTTAGTTCATTAGCAAGGTAA 2523 0.3952 MVKHFVLLCLTLSALIHAQDQSEFISIDCGVVDEPSYKDETTGIEYSSDGNATDTGINRRISSEYMVKSLERRFWNVRSFPEGTRNCYTLYLPRMNSNKRVIRARFMYGNYDGKDSLPKFDLYLGPNFWDSVEFENASTVTTMEIVHVATSDYIQICLVNTDEGTPFISTLEIRVLNDGTYVSESIQLLERFDVGLQEGQIVRYPDDIYDRIWSPYNPHGWKQISTTLAVANGGPFSYGVPSTVLKTAATPENVTDNLGFSYQLSNGAVRFYVYMYFAEIEKLEADQTRQFDVFVNGALLQNNATLPFLGHGTLIYISSEPETVLQIWINRTNKATMSPILNGIELYQGKTLDLPQTHQNDVGAIMQIKSTYNMKQIWQGDPCSPKTEMWKGVNCSYNGHNQPRITSLNLSSSGLNGSIVEAISNLKLIQYLNIGDNKLSGSIPSKLSERTRNGSLLILIVGGNPHLCFSSPCPTRKKIVIPLVVTALAALILSATLSFVYRRRLQVVLNRHKLSCFNKTVSVDSKKQEFTYSEVRSITNNFERVVGKGGFGIVYHGCIGETQVAVKMLTASTQGYQQFQTEANILTRVHHKCLTPLIGYYNEGNRTALIYEYMTNGDLSDKLSGESQTFLDWKQRLQIALDAAVGLEYLHNGCKPPIVHRDVKTRNILLNENLRAKISDFGLSRIFSDEGDTHVSTVIAGTPGYLDPEYYITNRLNEKSDVFSFGVVLLEIITGRKAILKSSVKTHIIKWVSSILEDDGEIDGIMDPRLQGDYDSDAARKVVDVAMVCVAPSSVNRPSISQVAMELKLCFPIAELRSASSGSIEIASINEISGFSSLAR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1488 840 PANTHER OS07G0107800 PROTEIN-RELATED 431 840 - -
Pvu10g1488 840 PANTHER OS07G0107800 PROTEIN-RELATED 1 437 - -
Pvu10g1488 840 Gene3D Phosphorylase Kinase; domain 1 521 613 - -
Pvu10g1488 840 Pfam Malectin-like domain 27 348 IPR024788 -
Pvu10g1488 840 Pfam Protein tyrosine and serine/threonine kinase 542 803 IPR001245 GO:0004672|GO:0006468
Pvu10g1488 840 Gene3D - 191 351 - -
Pvu10g1488 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Pvu10g1488 840 CDD STKc_IRAK 546 808 - -
Pvu10g1488 840 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 437 - -
Pvu10g1488 840 PANTHER TYROSINE KINASE FAMILY PROTEIN 431 840 - -
Pvu10g1488 840 ProSiteProfiles Protein kinase domain profile. 540 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1488 840 ProSitePatterns Protein kinases ATP-binding region signature. 546 567 IPR017441 GO:0005524
Pvu10g1488 840 SMART serkin_6 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1488 840 SUPERFAMILY L domain-like 364 468 - -
Pvu10g1488 840 SUPERFAMILY Protein kinase-like (PK-like) 524 807 IPR011009 -
Pvu10g1488 840 Gene3D Ribonuclease Inhibitor 362 478 IPR032675 -
Pvu10g1488 840 Gene3D Transferase(Phosphotransferase) domain 1 614 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1488 Pvu-Chr10 41493409 41500189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1488 5 840 Receptor kinase-like Gene Family AT2G19210 44.242 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu10g1488 Malectin_like 4e-102 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1488 - - pvu:PHAVU_010G143100g 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1488 10 41493409 41500189 Pvu10g1488 10 41493409 41500189 ECH
Pvu5g1669 5 38693788 38698970 Pvu10g1488 10 41493409 41500189 PCT
Pvu10g1488 10 41493409 41500189 Pvu5g1670 5 38700489 38705124 PCT