Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1472 ATGGAAAGCAATGCGGAAAGAGAAAGGAGTTCTGCAGAATCTTATTCTCCATCACATTCAAAAGAGTCATTACCAATGAAGAAAAGGAAGTTATGTTGCAGATATTGTAATAAGAAGTTCCACAATCATCAAGCTTTGGGTGGACATCAGAATGCACACAAGGCAGAAAGAGCAATAACACAAAAAGAGAAGATTCTTAGCATGGCTTCTGCTTATGGAAAAAATTCATATGTTGGTGACTTTCTTGATTCAAACAAATGTGATGGATTCAAAGGCAAAACATTAGGGGTGTCAACACTCTCCATGACTCATTTTAAGCCACAACATAGCAAACCACACATTGCACTCAAACATGATTCATGGTCGGGGCACTATACTTCCGATTATGTTCAAGCTACCATTCACAAGTTGGAGTCTTTGATAGATGAAGGGAGTGAATTTCATCAACACCAAAAATCATATCAACCTTTGATTTTTCCTATTCTTGGAGGTGGAGCACCAAATTCAGGGTCACAATCACAATTATTGTTTAATCCTGGTTTATGTGACATGGAGAATTTTTGGCAAGCTAAAGATTCTTCAATGATATCACATAATGAAATCACATATATGTCTGGTTTAAATGGAAAGACTTCACTTGATGATAAGAATTCTGCCGAAGAAAATAGTTTTTCTCCAATGACTGCTAATGGAGTGGTGGAGGAACTTGATTTGACTCTCAAGATTTGA 729 0.3676 MESNAERERSSAESYSPSHSKESLPMKKRKLCCRYCNKKFHNHQALGGHQNAHKAERAITQKEKILSMASAYGKNSYVGDFLDSNKCDGFKGKTLGVSTLSMTHFKPQHSKPHIALKHDSWSGHYTSDYVQATIHKLESLIDEGSEFHQHQKSYQPLIFPILGGGAPNSGSQSQLLFNPGLCDMENFWQAKDSSMISHNEITYMSGLNGKTSLDDKNSAEENSFSPMTANGVVEELDLTLKI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1472 242 PANTHER ZINC FINGER PROTEIN KNUCKLES 14 242 - -
Pvu10g1472 242 ProSitePatterns Zinc finger C2H2 type domain signature. 32 53 IPR013087 -
Pvu10g1472 242 SUPERFAMILY beta-beta-alpha zinc fingers 28 59 IPR036236 -
Pvu10g1472 242 MobiDBLite consensus disorder prediction 1 15 - -
Pvu10g1472 242 PANTHER ZINC FINGER PROTEIN JAGGED 14 242 IPR045320 GO:0003700
Pvu10g1472 242 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Pvu10g1472 242 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1472 Pvu-Chr10 41351020 41351748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1472 25 114 C2H2 Transcription Factor Family AT5G14010 32.673 2.75e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1472 - - vra:106773069 245.358