Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1454 ATGGCTTCAAGCTCTGGTGCAGAGGGAGCGTCACTCGACGATTACGATTCCCTGATTGCAACCACCGATGTCGAGCTTCTCAAGCGAGCGTGGCGCAACGAGAAGGCGGCGCCGGAGATTCTCCGCTTCGAATTTCATTTGATTTCCCGCGTCAAGGAACAGATTCAACTCATGGAGGAAACCGTTGAGGAGAAATCCAGTGGCGGTAATAATCCTCTCTCAGTGTCTCTCTATCAGATGGACTTGGACAGAACCCTCTTTCTGTTGAGATCCTATCTCCGCATCCGCATCCAGAAGATTGAAAAGTACATGTTCCACATCTTAAAAACTGAAGAACTTTGGAACAGGCTATCTAAAGACGAGAAAGATTTCGCCAGAACGTGTACAGGTGACCTAAACCGACATCTAGAGGAGACTGTTCTGTCGAAGCTGCCAGAAAATTATCAGTCTGTTCTAAAGCAATCTGTAATAAGTGAAGAGGACGACATGGTACCAGAACCAGAACTAGACACATTTGTTTTATGTAGAAGTAAAGAGTATCTGACGGGCATTCAACTGGAAGATGGACCTGCTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCATTTCATATGTTACAAATCCATAAAAGCACTTGTGGAGAGTGGCAAAATTGATCTACTCTAA 678 0.4572 MASSSGAEGASLDDYDSLIATTDVELLKRAWRNEKAAPEILRFEFHLISRVKEQIQLMEETVEEKSSGGNNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHILKTEELWNRLSKDEKDFARTCTGDLNRHLEETVLSKLPENYQSVLKQSVISEEDDMVPEPELDTFVLCRSKEYLTGIQLEDGPADDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1454 225 SUPERFAMILY GINS helical bundle-like 20 152 IPR036224 -
Pvu10g1454 225 Pfam GINS complex protein 50 122 IPR021151 -
Pvu10g1454 225 PANTHER SLD5 PROTEIN 12 225 IPR008591 GO:0006261
Pvu10g1454 225 SUPERFAMILY PriA/YqbF domain 169 225 - -
Pvu10g1454 225 CDD GINS_A_Sld5 23 141 IPR038749 -
Pvu10g1454 225 Gene3D - 11 215 - -
Pvu10g1454 225 Pfam DNA replication complex GINS protein SLD5 C-terminus 167 225 IPR031633 -
Pvu10g1454 225 PIRSF GINS_Sld5 1 225 IPR008591 GO:0006261
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1454 1 163 Core DNA Replication Machinery Family AT5G49010 66.258 1.78e-70 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1454 K10735 - gmx:100784291 372.474