Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1451 ATGAATAATTTAAGTATTACAGTTGTGGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACCATCTTCAATGCCTCACCTTACTCACCTTTACTTCCCTTCAAATGCTTATGTACAAATGGAAAGCCTGCTTATGTGACTATAAAGATAGACAACCAGAAGTTTGCAGAAACAAGTGAAGAAAGCAACCGTGTGTGGAACCAAACCTTTCAGATTCAATGTGCTCATCCAGCTGATTCATGCATCACCATTACACTGAAAACATCACGTTCTTCCATATTGGGAAAGTTCCATATTCAGGCTCAGCAGCTATTGAAGAAAGGAGGTTTGATCAACGGGTTATTCCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTTAAATTGAAGTTTATGCTATGGTTCAAGCCAGCAGATTTGGAACCAAGTTGGGCAAAGATGTTGAGCAATGACTGGGAATTTCAAGGGCTGAAGGAGGCTAGCTTCCCACTAAGGTCCAATTGTCAGGTTAAACTTTATCATGATGCTCACCATTCTTCAGCTTTTCAACCTCCCTTTGATCTATGTGGAGCTCCAAATAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTACTTAGTTTATATTGCAGGATGGTTCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCACACAGAAATCCCACATGCCAGAGGAGTTAAGTTAGGTGACATATTAAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTTTGGGATGATGAAACATCTTTACCCTTTGTTAAGAACAAAGGTGAATTGAACAACCAAGATGAGGAAGCTTTTGCCTTTTTCAACCACACAAAAGTGATATGCAGAAAGTGTCCAAGATTACACCATATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACAAAAGCACCAAAATCTGTTGATGACAGAGAGCTTATGAGCTTTGTGGGAGGGTTGGATTTGTGTGATGGAAGATATGACACAGAGCAGCATTCATTGTTTCAAACACTCATGAGGGAATCTCATTGCTATGACTTCTACCAAACAAGCATTGAAGAAGCTAGCCTCAACAAAGGAGGACCAAGAGCACCTTGGCATGATGCTCATGCCTGTGTTACTGGTGAGGCTGCTTGGGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAATCCCTTCTAGCACCTTGGCAAATCTTATGCCTAGAACAAGCTCAAGCACTCCTACGGAGAGGAATTGGAAAGTTCAAATATACAGGTCAATTGACCATATCTCAGTTGGTGAGTTGTCTACAAAGTCAACTGTGGAGAGGAGCATCCATGAAGCTTATGTTGAAGCAATTAGGCGTGCTGAAAGGTTTATATACATTGAAAGCCAATATTTCATTGGGGGCTGCCATTGGTGGAAGAAAGATAGGCACTGTGGCCGCACTAATCTGATTCCCATTGAAATTGCACTGAAGGTGGTAAGCAAGATTAAGGCAAAGGAGAGATTTGCTGTGTACATAGTCATACCAATGTGGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACTAGAGAAACAATGGCAATGATGTATAGGTTGATTGGAGAAGCATTACAAGAAAGTAGACAACCAGGACACCCTAGAGACTACTTGAATTTCTTCTGTCTTGCAAACAGAGAGCAGAAGGGACCAGGGGAGTATCTTCCTCTAGATTCACCCAAACCTGAAACACAATACTGGAATGCTCAAAAGAATAGGAGATTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGACCTATACATATTGATAGGATCAGCTAATGTGAACCAAAGATCGATGGATGGAGAAAGGGACACTGAGATTGCAATAGGATGCTACCAGTCTCAAGATGGAGATGATGATGATAAGCACCAAATGAGCCTAGATGATATTCAAGCATATAGAATGTCTCTATGGTATGAGCACACAATGAGTGTTGATGAACTGTTGTTGGAGCCAGAGAGATTGGAATGTGTGGAGAGAATGAGATCAATAGGAGATGAAATGTGGGAAATGTACAGCAGTGAAGAAATTAGAGACATGGAAGGTGTGCACCTTGTGAGTTACCCTGTGAGAGTAACACCAGAAGGGTATGTGAAGGACCTCACTGATGGAGTTCATTTCCCTGATACAAATTCTCTTGTCAAAGGCAAAAGGTCCAAAATATTGCCCCCTATCTTCACCACTTAG 2316 0.4175 MNNLSITVVEETPKLLHGTIEATIFNASPYSPLLPFKCLCTNGKPAYVTIKIDNQKFAETSEESNRVWNQTFQIQCAHPADSCITITLKTSRSSILGKFHIQAQQLLKKGGLINGLFPLLMDNGKPNPKLKLKFMLWFKPADLEPSWAKMLSNDWEFQGLKEASFPLRSNCQVKLYHDAHHSSAFQPPFDLCGAPNKLWEDVYKAIEGAKYLVYIAGWFFNPMMVLVRDPHTEIPHARGVKLGDILKKKAEEGVAVRVMLWDDETSLPFVKNKGELNNQDEEAFAFFNHTKVICRKCPRLHHMFPTLFAHHQKTITVDTKAPKSVDDRELMSFVGGLDLCDGRYDTEQHSLFQTLMRESHCYDFYQTSIEEASLNKGGPRAPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLIPSSTLANLMPRTSSSTPTERNWKVQIYRSIDHISVGELSTKSTVERSIHEAYVEAIRRAERFIYIESQYFIGGCHWWKKDRHCGRTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGEPESEPVQDILHWTRETMAMMYRLIGEALQESRQPGHPRDYLNFFCLANREQKGPGEYLPLDSPKPETQYWNAQKNRRFMVYVHSKFMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQSQDGDDDDKHQMSLDDIQAYRMSLWYEHTMSVDELLLEPERLECVERMRSIGDEMWEMYSSEEIRDMEGVHLVSYPVRVTPEGYVKDLTDGVHFPDTNSLVKGKRSKILPPIFTT* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1451 771 Pfam Phospholipase D C terminal 689 760 IPR024632 -
Pvu10g1451 771 SUPERFAMILY Phospholipase D/nuclease 437 690 - -
Pvu10g1451 771 Gene3D Endonuclease Chain A 454 659 - -
Pvu10g1451 771 PANTHER PHOSPHOLIPASE D ALPHA 9 771 - -
Pvu10g1451 771 SMART pld_4 306 343 IPR001736 GO:0003824
Pvu10g1451 771 SMART pld_4 614 641 IPR001736 GO:0003824
Pvu10g1451 771 Pfam C2 domain 46 119 IPR000008 -
Pvu10g1451 771 Gene3D Endonuclease Chain A 185 437 - -
Pvu10g1451 771 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 134 IPR035892 -
Pvu10g1451 771 PANTHER PHOSPHOLIPASE D 9 771 IPR015679 -
Pvu10g1451 771 PIRSF PLD_plant 9 771 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pvu10g1451 771 Pfam Phospholipase D Active site motif 617 641 IPR001736 GO:0003824
Pvu10g1451 771 Pfam Phospholipase D Active site motif 307 343 IPR001736 GO:0003824
Pvu10g1451 771 SUPERFAMILY Phospholipase D/nuclease 165 416 - -
Pvu10g1451 771 Gene3D C2 domain 34 139 IPR035892 -
Pvu10g1451 771 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 306 343 IPR001736 GO:0003824
Pvu10g1451 771 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 614 641 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1451 Pvu-Chr10 41186511 41190685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1451 34 771 Phospholipase D Gene Family (Wang group) AT1G55180 60.881 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1451 K01115 - gmx:100812642 1486.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1451 10 41186511 41190685 Pvu10g1451 10 41186511 41190685 ECH
Pvu5g1652 5 38572578 38575654 Pvu10g1451 10 41186511 41190685 PCT