Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1442 ATGGGGCTGCACCTGATTTTCCTGCTAATTGAGCTGCATTTAGTTGTCTGCACTCACCAGATTCATGCATATGCAGCCACCAAACTGCCAGATTCCAGTGACAGAAGGCATATTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAGGTCATTCAAGTATTATTGCACATTCACCTTCCAAGTCATCTTCTGGGGTACCTTCAAGCATTGCACTTTCACCTTCCAAGTCAATTCACAAAGCTCCTACAATCATATGGACACATGGTTCTGTGGATTCCCCAATCTCACATCATAAGCATCACTATTCTAAAAGAAAGTCACACAATCCAGCTCTAGCACCAATCTATTCAGTCCAGGCTCCTACATACAGCCATCAAGGTCCTTCAGTCTTCAAATCACGACCTCCTTTCTCTTCACCAAATATTATGGATATTCATGCCCCGGCTCCTGCACCATCCCCAGCTATTGTGCCGGGTCACCTCGATGTACCCTCTACTTCACCTACAATTTCTCCTCTAGGTTCATCATTGCAGAAGAAAAAGACTCCACCTCCAGCATATGAATTGGTTCTGCCACCTCCACCTCCTAATAAGGATTGCTTGCCAATGACTTGCTCAGAGCCCTTGACGTATACTCCTCCTGGGTCACCTTGTGGTTGTGTATGGCCACTTCAGGTTAAAATCCATATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTGCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTACTGAACCATACCCAGGTTCGCATTGTGGAAGCTGATGCAGCTAGTCAGCAACTGGAGAAAACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACCGCATTTTTAATATATAAGAAATTCTGGCGCAGGGAGATTCTGATAGATGCTTCAGTTTTTGGTGCTTATGAAGTACTCTATGTTCAGTATCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCAGATGCTTCTGTTATAGATGATGAGCCAAATCCAGGACATGACAACAATGGAATGATGATGAAACCTTTAGGAGTAGATGTCCCAAAGAGGAAAAAAGAAGGGAGTAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACTGCTTTTGTTGTATTCATTGGTCTTGCTTGGATTTGTGCACTGAAATGCTGTGCCTATGTTCATGAACACAAACCACTTCCCGATGGTTTAATTTCATCCTCTTCAAAACAATCAAGGGCTGCAAGTTCATTGGCTTACGGGGTCAGGTCAGGCTCTGGATTACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGAATGACATAGAAAAAGCAACAAATAACTTTGATTCTTCGAGAATATTAGGAGAAGGTGGTTTTGGACTTGTTTATGAAGGTGTTCTAAATGATGGGAGGAATATAGCCGTGAAGGTTCTCAAAAGAGATGATCAGCGTGGTGGTCGTGAATTCTTGGCAGAAGTTGAGATGCTTAGCCGTCTACACCATCGAAATTTAGTTACATTGTTTGGTATATGCATAGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGACCTGACAAGGAAACTGATCCACTGGATTGGACTGCGAGGATGAAGATTGCTCTTGGTGCAGCTCGGGGTTTGGCCTATCTGCATGAAGATTCAAATCCATGTGTCATACACCGGGATTTCAAGGCTAGCAACATCTTGTTGGAGTATGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGATACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCCGTGGATTTGTCACAACCACCAGGTCAAGAAAATCTTGTGACGTGGGTTCGTCCACTTCTCACTAGTAAGGAGGGTTTGCAGATGATCATAGACCCAGTTGTAAAGCCTAGCATTTCTGTTGATATTGTAGTTAAAGTTGCAGCGATTGCATCCATGTGTGTGCAACCAGAAGTCTCACAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTGGTGTGCAGTGAGGTTGAGGAAACAGACTATTTAAGATCAATGAGTTATCAAGAGGGTATTCTAACTGATGTGGAAGGAAAGTTTTCTGAAGCTTCAGGTGAAAGAGTGGAATTTTCGGAGTATCAAAAAACTCTTTCTGGCTATCAATCTGGTGAAGAAAAGGTAGAATTATCAGCATCAGAGTTTCTCAGTACTTCAGGCCAGGAATTTGAGTCATTCAGGAGGTATTCTCGATCAGGGCCTCTAACTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGCGAAGTTTGTCAAGTGGTAGTACCAGTGAACACGGATTTTCAACTAAACTATGGTCTGGATCCCATTAA 2574 0.4274 MGLHLIFLLIELHLVVCTHQIHAYAATKLPDSSDRRHISIAIPPSKSSSEGHSSIIAHSPSKSSSGVPSSIALSPSKSIHKAPTIIWTHGSVDSPISHHKHHYSKRKSHNPALAPIYSVQAPTYSHQGPSVFKSRPPFSSPNIMDIHAPAPAPSPAIVPGHLDVPSTSPTISPLGSSLQKKKTPPPAYELVLPPPPPNKDCLPMTCSEPLTYTPPGSPCGCVWPLQVKIHINIAIYKFFPLVAELAKEIAASVLLNHTQVRIVEADAASQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWRREILIDASVFGAYEVLYVQYPGLPPSPPSTPSDASVIDDEPNPGHDNNGMMMKPLGVDVPKRKKEGSNGRMIVIIVLSSVTAFVVFIGLAWICALKCCAYVHEHKPLPDGLISSSSKQSRAASSLAYGVRSGSGLQSFNSGTITYTGSAKIFTLNDIEKATNNFDSSRILGEGGFGLVYEGVLNDGRNIAVKVLKRDDQRGGREFLAEVEMLSRLHHRNLVTLFGICIEKQTRCLVYELVPNGSVESHLHGPDKETDPLDWTARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPVVKPSISVDIVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEVEETDYLRSMSYQEGILTDVEGKFSEASGERVEFSEYQKTLSGYQSGEEKVELSASEFLSTSGQEFESFRRYSRSGPLTIGKKRQFWQKLRSLSSGSTSEHGFSTKLWSGSH* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1442 857 SUPERFAMILY Protein kinase-like (PK-like) 446 739 IPR011009 -
Pvu10g1442 857 PANTHER OS01G0750732 PROTEIN 6 856 - -
Pvu10g1442 857 CDD STKc_IRAK 472 740 - -
Pvu10g1442 857 MobiDBLite consensus disorder prediction 42 74 - -
Pvu10g1442 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Pvu10g1442 857 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Pvu10g1442 857 ProSiteProfiles Protein kinase domain profile. 466 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1442 857 Gene3D Transferase(Phosphotransferase) domain 1 542 760 - -
Pvu10g1442 857 PANTHER OS01G0750732 PROTEIN 6 856 - -
Pvu10g1442 857 MobiDBLite consensus disorder prediction 328 353 - -
Pvu10g1442 857 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Pvu10g1442 857 Gene3D Phosphorylase Kinase; domain 1 439 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1442 Pvu-Chr10 41090089 41096321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1442 198 857 Receptor kinase-like Gene Family AT5G56890 60.327 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu10g1442 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1442 - - gmx:100814040 1437.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1640 5 38474228 38479812 Pvu10g1442 10 41090089 41096321 PCT