Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1421 ATGCAAAGTTCGGAGATGTGTTCCCCCTTTGGCGAAAAGTACGATGTTTTTGTGAGTTTCAGAGGAGCAGACACACGAACAAACTTCACAAACCATCTTCTGAATGCTCTGACTCAGAAATCAATCAGCGTATTCATAGATTACGAACTCACCAAAGGAGACTACATTTGGCCAGTCCTTGCCAGAGCAATCGAGGGGTCTCGTGTGTCAATTGTTGTTATATCCGAAAACTATGCCTCCTCCAGCTGGTGCTTGAAAGAGCTGGAACACATACTCCAATTCAGAAGAACTCGGGGTATGGTTGTTATACCCGTCTTCTATGAAGTAGATCCCTCACACGTAAGGAAGCTGAGTGGGAGTTTTGATAAGTCTTTCGCAAAGCATGAGCTAGACACCGGATCATGTTCATGGGACCCAGAAGCCCACAGGAAGGATGTTTCTAGGTGGAAAGCTGCTCTCAAACAAGCAGCCAATATTTCTGGATGGGACTCCAGATCATACAGAAATGAAGCAACGTTCATCCAGAATCTTGTCAATGATGTATTGCAAAAGCTACAGCAGAGATATCCTACAGATCTAAAAGGCTTAGTCAGCATGAAAAATACTTGTGGAAAGGTGGACTTGTTAGTGCAAAAATATCGAGTCATTGGAATTTGGGGTATGGGGGGAATTGGTAAGTCAACCATTGCTAAAGCCTTGTTTGCCAAATACTTTCCCTCTTTTGATCATGTCTGCTTCGTGGCCAATGCAAAAGAATTTTCGCTCGATAAGCTTTTCTCTAACCTATTCAGAGAGGAAGTTTCCGCATCAAATGTGGTAGGATCAACATTTGATATGAGGAGACTCAGAAGGAAAAAGATTTTGATTGTACTTGATGATATGGATCGCTTAGACGTATTGGAATATTTATGTAGAGAGTATGAGGACCTAGATCCCGCTAGTAAACTCATCATAACAACACGAGATAAGCAATTGCTCGAGGGAAGAGTTGATCAGATCTATGAGGTCAAGAAATGGAAAACCAGAGCATCTTTAAAGCTTTTTTGCTTTGAAGCCTTCAAGCAAAAACATCCAAAAAAGGGTTATGAGATTCTCTCAGAAAGTGCAGTTGAATATGCCGGTGGTGTTCCACTAGCTCTTAAAGTTTTGGGTTCATATCTTCGTTCAAAAGGTATCAATTTTTGGGAAAGTACTATAAGAAAACTCAGCTTGTATCCTAACGAGAGAATTCAGAAAGTGTTAGAAGTGAGCTACACTGGATTACATGATCTAGAAAAGAATATATTTCTAGACATTGTATTCTTTTTCAAAGAAAAACAGAAAGATCATGTCATTAGGATACTAGATGCCTGTGGTTTTGAAGCAACTAGTGGGATAGAAGTTCTCGCAGATAAAGCTTTGTTAACAATTTCAAATAGAAAGATAATACGTATGCATGACTTGCTGCAACAAATGGGTTTGGAGATTGTACGTCAAGAGAGTAGTGGGGATCCTGGTAGCCGTAGTCGATTGAAGGATAATGAAGCTAGGGAAGTGATTGAAGAAAACAAGGGAACTGATGCTATTCAGGGCATAGCATTAGATTTGTCTCAAATTAAAGGTTTAATTTTGCATGCTGACACATTCACAAAGATGAAAACCTTGAGATTTCTGAAATTCTACAACACATTGGGTCAGAGTGCTAGAGATACATACCTTGACCTTCCTGGAACTATTGAGCCATTTTCTGATAAACTGAGGTACATTGAGTGGATTGGTTACCCGTTTGAGTCTCTTCCATCACCTTTTTGCGCTAAGGTTCTTGTTGAGATTCACATGCCACACAGCAAAGTAAAACAGCTTTGGCAGGGGATCCAGGAGCTCAATTATTTAGAAGGAATTGACCTAAGACAATGCAAGCAGTTTGAGGAGCTTCCAGATTTGTCTAAGGCACCAAGACTTAAATGGGTGAATCTCTCCTATTGTGAAAGTTTGCAGCATCTTCATCCATCTGTTTTATCCTCAGGCACACTTGTTACTTTGATACTGGATAAGTGTACAAACCTCAAGAGTGTTAAAAGTGAGAAACATTTAAAATCTCTAGAGAAGATCAGTGTTAATGGCTGCTTAAATCTGGTGGAATTTGCAGTTTCATCAGATTTAATTGAAAATTTGGATTTAAGCTATACAGGAATCCAAACATTGGACACATCAGGGAGTATGCATAAACTTAAGTGGCTCAATCTGGAGGGCTTAAACCTCAAGCATATTTTAGGAGAGTTATCTTGTTTGACATCTCTCAAGGTGCTGAAGATTTCGGGTAATGAACTGGTAATAGACAAACAGCAAATACATGTCCTGTTTAATGGATTAAGGTACCTGCAAATACTATATTTGAAGGATTGTATTAAGTTGTTTGAACTCCCTGACAACATCAGTCTCTTGACACAATTACAGGAATTAAGGTTAGACAGAAGCGATTTGAAAAGGTTGCCTGAAAACATTAAGAATCTTAAAATGTTGGAAATTCTGTCCCTCGAGGATTGCAAGGAGCTTCTTTGCCTACCAAAGTTTCCATCCCTCATCAAACACTTACGTGCCATTAACTGTACATCATTGGTGTCAGTGACAAACTTGAAGACATTGGCAACAGAGATGTTGGGAATGACTAAACGCATTACATTCAAGAATAGTGGGAAATTGGATGGACATTCACTCAGAATTATTATGGACAGCCTCCATTTAACAATGATGAGTGCTGCATATCACAATGTGTTAGTAAGATCATATGGGACATACAAAATTTGCAACTATACGAGTGTTGAGCTCTGTTTACCCGGAGGGACTGTCCCTGAGCATATCCATTATCGATCCACTAAGTCCTCCATTACCATTGCACTTCCTTCGCGTTCTGAATTACTGGGCTTCATTTACTCAGTGGTTCTTTCTCCAATTGGTGGAATGAAGACTGACGGTGCTAAGATATTTTGTAAATGCCACTTGCCAGAAGAAGGTATAAAGGCAACATGGCTATATGGTGATATCAGGGGATTGAAGTCGGATCATGTTTATGTATGGTATGATCCATTACATTGTGACAACATTCTCAGATATTATGAACTATCAAAGGTTTGTTTTGAGTTCTGTGTTGCAAATGATAAGGGGGAAGTTGACGGTTCCATCTGTATTAAAGAGTGTGGGGTAGGCATTATAAATGTTTTAGAAGTGCATAGTGTTTTACAAGAGTTGGACTTTGATTCGGATAAGAAAAAGAAGTTGGTGGAGGGAGTGGAGTTGGAATCAAAGCTTGGGAATCAACAACGGGTTTGGAGTGAATCAAGCTCTTCTGATACCTCTGAGTCAGACTCAGAGATTATTGTTAAACCAGATTCAGCTGAAAAGGGTAAATCTCCTCACAAGGAAATCAAAACTGATTCCAGAACAAATGCACTCAAATACGGAAGTAATAAAGAAGCACCAGTTAAATCAGATGCAACATTGCACGAGACCGTGGGGTCACATTTAGACAATGAAAATGAGTTTAGAGAAAAGTCAATCACACAATCAAAGGTAGTAGTTATGGTTGAGCTAGAGAACACTGAATCGACTTGCAAGGAAACCCTGAGCACTGCTAAAAGAAGTCCAAAAGAAAATTCTAGAGAGTCTACAGAAATTGTGGCCAATGAACATTTCACACCACTTCAAGCCTCTTCCCAAGGGAGCTCTGAGCACTTGCATGATAGGTTAGACAAATCGAATAAGCAAGTTGTAGAAACTCATGATACAGATAAATTTGTTACTGAATACTCATCCTTTGACCTTGAGAATTGCCTCCAACAGTTGGATGAAAATCCATTTGCAATCCTTGACTTACTCTCTAATGAGCCATCTCCTTCACTGAAACAATCAGAAACTTGTGTTCAAAAGGTAGCTCAAGCAAATGATGCTACAACCATCCTCAATGAGTTCCGAACCTTAGTGTTCTCAACTTCGTTGCTAAAGAAACTTCCAGACCAGTCCTATCGGCAACAAATTGAAGAATCACTACACAAGCTTAACACTTATCGTAGAGAAATTACAGAAGAGCAAAATGAGGGTTTAGAAAAATTTATAGAGCTATACAATAAAGCTTCCAAAATTTCTCAAGATAAGATGTTAACCGAGGATGAACAAGCAAAACTGGCATCTGAGAAGAGGGAGTTGTATAACAAACTTCAAGATTCTAAACTGAAAGTTCAACAGTTTGACACCACCATCTCAACTAGTAAGTCTGAGATTGAAAACCTCCAAAAAAGGCAAAGGGAAATCCAGGAAGCTATAAAAAAGCTTCAACAAGAAAAGGAAGCCTTGGAAAAGGAGAGGTCAACACTAGAGTTTTTATGCTCAGAAAAACAAACAAAGAAGAACGAAACACTTGAATCAGTGAAGCATATCTCAACTTCTGTTGTTTACACAACCAAACAATTAAAAGAACTTGTAGAGAAAAGATTGAGTTTGGTTTCAGCTTACGAAGACCTCAAAAAGCCATATCAAAGAATGAAGACAAAGCCCCCATTTTAG 4539 0.3908 MQSSEMCSPFGEKYDVFVSFRGADTRTNFTNHLLNALTQKSISVFIDYELTKGDYIWPVLARAIEGSRVSIVVISENYASSSWCLKELEHILQFRRTRGMVVIPVFYEVDPSHVRKLSGSFDKSFAKHELDTGSCSWDPEAHRKDVSRWKAALKQAANISGWDSRSYRNEATFIQNLVNDVLQKLQQRYPTDLKGLVSMKNTCGKVDLLVQKYRVIGIWGMGGIGKSTIAKALFAKYFPSFDHVCFVANAKEFSLDKLFSNLFREEVSASNVVGSTFDMRRLRRKKILIVLDDMDRLDVLEYLCREYEDLDPASKLIITTRDKQLLEGRVDQIYEVKKWKTRASLKLFCFEAFKQKHPKKGYEILSESAVEYAGGVPLALKVLGSYLRSKGINFWESTIRKLSLYPNERIQKVLEVSYTGLHDLEKNIFLDIVFFFKEKQKDHVIRILDACGFEATSGIEVLADKALLTISNRKIIRMHDLLQQMGLEIVRQESSGDPGSRSRLKDNEAREVIEENKGTDAIQGIALDLSQIKGLILHADTFTKMKTLRFLKFYNTLGQSARDTYLDLPGTIEPFSDKLRYIEWIGYPFESLPSPFCAKVLVEIHMPHSKVKQLWQGIQELNYLEGIDLRQCKQFEELPDLSKAPRLKWVNLSYCESLQHLHPSVLSSGTLVTLILDKCTNLKSVKSEKHLKSLEKISVNGCLNLVEFAVSSDLIENLDLSYTGIQTLDTSGSMHKLKWLNLEGLNLKHILGELSCLTSLKVLKISGNELVIDKQQIHVLFNGLRYLQILYLKDCIKLFELPDNISLLTQLQELRLDRSDLKRLPENIKNLKMLEILSLEDCKELLCLPKFPSLIKHLRAINCTSLVSVTNLKTLATEMLGMTKRITFKNSGKLDGHSLRIIMDSLHLTMMSAAYHNVLVRSYGTYKICNYTSVELCLPGGTVPEHIHYRSTKSSITIALPSRSELLGFIYSVVLSPIGGMKTDGAKIFCKCHLPEEGIKATWLYGDIRGLKSDHVYVWYDPLHCDNILRYYELSKVCFEFCVANDKGEVDGSICIKECGVGIINVLEVHSVLQELDFDSDKKKKLVEGVELESKLGNQQRVWSESSSSDTSESDSEIIVKPDSAEKGKSPHKEIKTDSRTNALKYGSNKEAPVKSDATLHETVGSHLDNENEFREKSITQSKVVVMVELENTESTCKETLSTAKRSPKENSRESTEIVANEHFTPLQASSQGSSEHLHDRLDKSNKQVVETHDTDKFVTEYSSFDLENCLQQLDENPFAILDLLSNEPSPSLKQSETCVQKVAQANDATTILNEFRTLVFSTSLLKKLPDQSYRQQIEESLHKLNTYRREITEEQNEGLEKFIELYNKASKISQDKMLTEDEQAKLASEKRELYNKLQDSKLKVQQFDTTISTSKSEIENLQKRQREIQEAIKKLQQEKEALEKERSTLEFLCSEKQTKKNETLESVKHISTSVVYTTKQLKELVEKRLSLVSAYEDLKKPYQRMKTKPPF* 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1421 1512 Pfam NB-ARC domain 214 412 IPR002182 GO:0043531
Pvu10g1421 1512 PRINTS Disease resistance protein signature 215 230 - -
Pvu10g1421 1512 PRINTS Disease resistance protein signature 281 295 - -
Pvu10g1421 1512 PRINTS Disease resistance protein signature 373 387 - -
Pvu10g1421 1512 PRINTS Disease resistance protein signature 829 845 - -
Pvu10g1421 1512 Pfam C-JID domain 938 1064 IPR045344 -
Pvu10g1421 1512 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 162 IPR035897 -
Pvu10g1421 1512 Gene3D - 11 185 IPR035897 -
Pvu10g1421 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 432 IPR027417 -
Pvu10g1421 1512 Gene3D - 340 422 IPR042197 -
Pvu10g1421 1512 SUPERFAMILY L domain-like 477 863 - -
Pvu10g1421 1512 Pfam TIR domain 13 194 IPR000157 GO:0007165
Pvu10g1421 1512 Coils Coil 1338 1358 - -
Pvu10g1421 1512 Pfam Leucine Rich Repeat 601 619 IPR011713 -
Pvu10g1421 1512 SMART till_3 13 159 IPR000157 GO:0007165
Pvu10g1421 1512 MobiDBLite consensus disorder prediction 1101 1135 - -
Pvu10g1421 1512 Coils Coil 1405 1456 - -
Pvu10g1421 1512 MobiDBLite consensus disorder prediction 1101 1115 - -
Pvu10g1421 1512 Gene3D - 186 333 IPR027417 -
Pvu10g1421 1512 Gene3D Ribonuclease Inhibitor 490 713 IPR032675 -
Pvu10g1421 1512 Gene3D Ribonuclease Inhibitor 714 887 IPR032675 -
Pvu10g1421 1512 MobiDBLite consensus disorder prediction 1225 1247 - -
Pvu10g1421 1512 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 822 1083 - -
Pvu10g1421 1512 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 819 - -
Pvu10g1421 1512 MobiDBLite consensus disorder prediction 1116 1135 - -
Pvu10g1421 1512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 822 1083 IPR044974 GO:0006952
Pvu10g1421 1512 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 819 IPR044974 GO:0006952
Pvu10g1421 1512 ProSiteProfiles TIR domain profile. 12 185 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1421 Pvu-Chr10 40920056 40929831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1421 14 843 WRKY Transcription Factor Family AT4G12020 30.211 1.76e-83 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1421 - - vun:114165831 2445.23