Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1398 ATGTCCAATTCCCAACCAAACTCCGATCCGAAGACCCGAACCCGAGCCTACAATCCCTACAAGGATCTCGATGCTCCAATTCGAAACCTCTACCACCTCCCCACCTCGCCGGAATACCTCTTCGTCGAGGAGGCCCGCCGCAAGCGCCGCTCCTGGGGCGAGAATCTCACCTTCTACACCGGCTGCGGCTACCTGGCCGGAGCCCTCGGAGGCGCCGGCGCAGGCCTCTTAGACGGTGTCAGGGCCTTCGAGTCCGGCGACACAGCGAAGCTCCGAATCAACCGCGTTCTGAACGCGGCGGGACACTCGGGTCGGGTCTGGGGAAACCGGGTTGGGATACTAGGGTTACTCTACGCCGGAATCGAGAGCGGAATCGAGGCTGCTAGAGACGCCGACGATGTATGGAATAGCGTCGCAGCGGGGCTCGGCACCGGCGCGCTGTACCGGGCGGCGAGAGGGGTGAGGTCTGCCGCGGTAGCCGGGGCAGTGGGTGGCGCTTTCGCCGGAGTGGCCGTGGCGGGGAAGCAGGCTTTGAAACGATATGTGCCTATATGA 555 0.6378 MSNSQPNSDPKTRTRAYNPYKDLDAPIRNLYHLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGALGGAGAGLLDGVRAFESGDTAKLRINRVLNAAGHSGRVWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGAFAGVAVAGKQALKRYVPI* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1398 184 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 168 - -
Pvu10g1398 184 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 7 184 - -
Pvu10g1398 184 PANTHER TIM23 7 184 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1398 Pvu-Chr10 40644999 40646619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1398 3 180 Chloroplast and Mitochondria Gene Families AT1G17530 63.333 4.40e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1398 K17794 - gmx:100813158 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1613 5 38245482 38246460 Pvu10g1398 10 40644999 40646619 PCT