Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1395 ATGGCATCAACATCCATTGTGGTCGGAAAAGACAGCACCGTGATCGCAGTCAGTGGAGGTCGACACAGCAATGGTGCTGTGAAATGGGCTGTGGAACACCTCCTAAAGAAGAACTCCTCATGCATCCTTCTTCATGTTCGAACTAGGACCATGCTTACTCCTGAAATTAATGATGTACCCAAAAATGGTCGTCCACCAAATGAAGAAGAATTGCACCAATTTTTTCTTCCCTTTAGAGGATTTTGTGCTAGAAAAGGGATCACAACAAAGGAATTGGTCTTGCACGATCTTGATGTTTCAAATGCACTTATTGCTTTCGTTGTTGAAAATTGTATAAGCACCCTTGTTGTTGGTGCTGCTACTTCTTCTTGGGGTTCTCTTTTAAGGAGATTTAACAAAGATGATGTCTCAGCTAGTTTAGCAAAATTTTTACCAGATACTTGCAGTTTATATGTTACATCAAAGGGAAAAGTACAACATATTAGACCATCAGGTCATCATGCTCATCATGTTCATCATCGTCAACAACATGTTGAAGCCACACCAACTAAATCTTTAAAAGAGATAGTCAATATTTTGGAAAATGATCCACACAAGAATCCCACTAATAGCCAAGTAGCTTTTGACGATACAGAGAGGAAACATAGCAAAGATGCAATTAAGCACCAGTCTAATAAACTTTGGGAATATTTAAATGAAATTAATGATGCCACTCTAACAGTACAATATAAGTCCAATGAAAGTATCAATTCACCAAAAGGTCCAATTGATTACCCCCCATCACAAGCTTCATCTGTCAACAATTCTCCTGGAAATAGTGATAGCACAGGGAAATCACTTGGTCTTCCTTTGACTAATAACTCAAATCCTAAGAACATGTCTTCTGCAAAAGAACAAGTAATCTTTGATATGCAAATGAGGAAATTGAAATTAGAACTAGAAAAAACTACAGAGAAGTATGGTATGGCTTGCAAAGAAGCTGTTCTAGCTACACAAAAGGCAAAGGAGCTTGAAAAGTTTAGACAAGAAAAGGAACGTGACATAGAGGAAGTAAAACTTGCTCAAGTGTCTGCATTGGCTTTGGCAGAGGTAGAGAGACAAAAAACTAAAATGGCTATAAAGTCAACAGAAATGTCAAAACACCTAGCAAGAATGGAGACTCAAAAGAGAAAGGAAATTGAATTAAAAGTCAAACACGAAGAAGAAGAGGCTATTAAAGCATTGCATGAAGTTATATATACTAATATTCCCTATAGAAAATACACAATTGAAGATATTGAAGTTGCAACAAATAAATTCGACAATACTTTGAAAATTGGTGAAGGTGGATATGGACCTGTCTTTAAAGGAGTGCTTGATCACACTGTTGTTGCAATTAAGGCCATGAGACCAGATATAACCTATGCAGAAAAACAATTTCAACAAGAGGTCATTGTTTTAAGCACCATAAGACATCCAAACATGGTGCTTCTCTTAGGAGCATGTCCAGAATTTGGTTGCCTTGTATATGATTACATGGTAAATGGAAGCTTAGAAGATCGTCTATTCCGAAAAGATAACACTCCTCCAATTCCATGGAAAACACGTTTCAAAATAGCATCTGAGATTGCCACTGGCCTTCTTTTTCTTCATCAAACAAAGCCTGAACCCTTGGTGCATCGAGATTTGAAACCAGCAAACATTCTTTTAGACAAGAACTATGTGAGCAAGATCAGTGATGTTGGTTTGGCACGACTTGTTCCTCCTTCAGTCGCTAATCAAACCACACAATATCGTCTAACTGGTGCAGCTGGAACATTTTGTTACATCGACCCTGAGTATCAACAAACAGGATTGTTGGGTGTGAAATCAGATATATATTCACTAGGAGTGGTGTTGCTACAGATCATTACAGGAAAATCTCCAATGGGGTTGTCACACTTGGTTGAGAAAGCTCTTTTGTCAAATACTTTAAGTGAGGTGCTTGATAAAAGTGTTAGTGATTGGCCAATGGAAGAGACTTCATCGTTTGCTAAGTTGGCCTTAGAGTGTTGTGAATTGAGAAAACGTGATAGACCAGATCTTGGTACCATTGTCTTACCTGAATTAAATAGAATATCGAATTTATGGGATGATGAGAACAAACAACCCCTTTCTTATTACATGGGTTGA 2151 0.3775 MASTSIVVGKDSTVIAVSGGRHSNGAVKWAVEHLLKKNSSCILLHVRTRTMLTPEINDVPKNGRPPNEEELHQFFLPFRGFCARKGITTKELVLHDLDVSNALIAFVVENCISTLVVGAATSSWGSLLRRFNKDDVSASLAKFLPDTCSLYVTSKGKVQHIRPSGHHAHHVHHRQQHVEATPTKSLKEIVNILENDPHKNPTNSQVAFDDTERKHSKDAIKHQSNKLWEYLNEINDATLTVQYKSNESINSPKGPIDYPPSQASSVNNSPGNSDSTGKSLGLPLTNNSNPKNMSSAKEQVIFDMQMRKLKLELEKTTEKYGMACKEAVLATQKAKELEKFRQEKERDIEEVKLAQVSALALAEVERQKTKMAIKSTEMSKHLARMETQKRKEIELKVKHEEEEAIKALHEVIYTNIPYRKYTIEDIEVATNKFDNTLKIGEGGYGPVFKGVLDHTVVAIKAMRPDITYAEKQFQQEVIVLSTIRHPNMVLLLGACPEFGCLVYDYMVNGSLEDRLFRKDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVANQTTQYRLTGAAGTFCYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKSPMGLSHLVEKALLSNTLSEVLDKSVSDWPMEETSSFAKLALECCELRKRDRPDLGTIVLPELNRISNLWDDENKQPLSYYMG* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1395 716 Coils Coil 330 354 - -
Pvu10g1395 716 MobiDBLite consensus disorder prediction 194 220 - -
Pvu10g1395 716 SMART serkin_6 433 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1395 716 Pfam Protein tyrosine and serine/threonine kinase 438 692 IPR001245 GO:0004672|GO:0006468
Pvu10g1395 716 CDD STK_N 12 156 - -
Pvu10g1395 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Pvu10g1395 716 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 124 - -
Pvu10g1395 716 SUPERFAMILY Protein kinase-like (PK-like) 411 692 IPR011009 -
Pvu10g1395 716 MobiDBLite consensus disorder prediction 250 293 - -
Pvu10g1395 716 ProSiteProfiles Protein kinase domain profile. 433 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu10g1395 716 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 12 706 - -
Pvu10g1395 716 Gene3D Transferase(Phosphotransferase) domain 1 506 711 - -
Pvu10g1395 716 Gene3D HUPs 12 139 IPR014729 -
Pvu10g1395 716 Coils Coil 382 410 - -
Pvu10g1395 716 PANTHER OS02G0152300 PROTEIN 12 706 - -
Pvu10g1395 716 Gene3D Phosphorylase Kinase; domain 1 411 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1395 Pvu-Chr10 40623269 40627644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1395 8 705 Receptor kinase-like Gene Family AT1G78940 43.370 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu10g1395 PK_Tyr_Ser-Thr 2.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1395 - - var:108320196 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1395 10 40623269 40627644 Pvu5g1612 5 38241516 38244197 PCT