Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1381 ATGTTGACTTGCATAGCGTGTACCAAGCAACTAAATAATGGATCTCTTCGCCAAGAAGAAGAGGAAGAAGCTGTTCACACACCCAGCACCAAGCAAGCCATCAAGGCTCTCACTGCACAGATCAAGGACATGGCAGTGAAAGCTTCTGGGGCATATAAGAGCTGCCGACCTTGTTCAGGATCTTCCAATGGTAACAGGAATAGGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCTAGGTTCAACTGGGCCTACCGCAGAACTGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAGACAGAAGGTGGTAGGGTGAAAGGGCTTTCCAGTGGGGAAGGAACACCAGCTTCAGTGAGTGGACGCACTGAGTCAGTGGTGTTCATGGAAGAGGATGAGCCTAAGGAGTGGATTGCACAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGAAATGATCTCAAAAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCCGAAGATGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGTCACTCCTCCACTCAGCAAAGAGCGAGCACCCCGCCATTTTCACCACCCAATGGGAATGGGCTACTCCTCATCAGATTCAATGGATCACCACCAAATGCATCCTCACCCTTGCTATGAGACAAGTGGTCTGGCATCAACACCTAATCTTTCCAACATTACTGCACCAAAGACTGAAAAATCATCCCTTGATGGTTCTGCAAGGACTAGTTCATCTGGAGAAGATCACTCAGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTCTACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAGCTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4824 MLTCIACTKQLNNGSLRQEEEEEAVHTPSTKQAIKALTAQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKETEGGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPVTPPLSKERAPRHFHHPMGMGYSSSDSMDHHQMHPHPCYETSGLASTPNLSNITAPKTEKSSLDGSARTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1381 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Pvu10g1381 368 MobiDBLite consensus disorder prediction 90 123 - -
Pvu10g1381 368 MobiDBLite consensus disorder prediction 265 312 - -
Pvu10g1381 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Pvu10g1381 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Pvu10g1381 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Pvu10g1381 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Pvu10g1381 368 MobiDBLite consensus disorder prediction 200 312 - -
Pvu10g1381 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Pvu10g1381 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1381 Pvu-Chr10 40332635 40337353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1381 1 368 Major Intrinsic Protein MIP AT1G31880 49.347 1.83e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1381 - - gmx:100805480 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1381 10 40332635 40337353 Pvu10g1381 10 40332635 40337353 ECH