Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1375 ATGACATATTCTTATTCTTCCCGAGTTTTTGATAAAACCAAACGTGTTGTATTTGTTTGTCTCTTGCTGGCAGCGTTAGACAATAATAATAACTCTTCATATCCAGTGACAGATTTTGCTTATCCCAATGACTCCCTTCAGATAAAGTACGATGTGTTTGTTAGCTTTAGAGGCACAGATATCAGGCAAGATTTCCTTAGCCATTTGATTGAGGCGTTTTCTCGAATGCATATTAATGCGTTTGTAGATAACAAGATTGTCAAAGGAGATGGACTGTCTGAAGCACTTGTTCATGCAATTGAAGGATCACCAATTTCATTGATTATATTTTCACAAGACTATGCTTCTTCACATTGGTGTTTGTCAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAAAAATGGCCAGATTGTACTACCTATCTTCTACAAAGTGGATCCTTCATATGTACGGTATCAGAAGGGGACTTATGAAGTTGCCTTCGCTAAACATGAAATAAGATATAGTTTGACCACTACACAGACCTGGAGATCTGCTTTGACTGAATCTGCTACTATTTCAGGATTTCATTCATCAACTTTTCGGGACGAAGCTGAGTTTATCAAAGAGATAGTTAAATGTGTGTTGATGAGGTTGAATCAAGTGCAACAAGTTAACTCAAAAGGGCTTGTTGGAGTTGGTAAACGAGTTGCACATGTTGAATCATTGCTACAATCAGAAGGGCCTGATGTACGCATTATTGGAATATGGGGCATGGGTGGTATTGGTAAAACAACCATTGCGCAAGAAGTATATAATAAGTTGTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGAGAAGAATCGGGAAGACTTGGAATGATCTCTTTGAAGAAGAAGCTTTTCTCAACATTATTAGGAGGAGAAGATTTGAAAATTGACACACCCAATGGATTGCCTCAATATATTGAGAGAAGGCTTCGTCGTATGAAAGTTCTCATCATTCTTGATGATGTCAATGATTCAGATCAACTGGAAATTTTAGCTGGAACATATGATTGGTTTGGATCAGGTAGCAGAATCATCATAACAACCAGAGATAAGCAGGTACTAGCTAAAGAGTTTGCTAATATATATGAGGTTGAGGCATTAAACTTTGATGAATCCTTAAGGCTTTTCAATTTGAATGCCTTTAAGCAAAACCATCTTGAAAGTGAGTACCATGAACTTTCAAAGAAAGTGGTCAACTATGCCAAAGGGATTCCACTAGTTCTTAAAGTTTTGGGTCACCTCCTTCATGGAAAAGATAAAGAAACTTGGGAAAGCCAATTAGAAAGACTCAAAAAAGTGCAAAACAGAAAGGTCCATGATATTATTAAATTGAGTTACAATGATCTTGATCAGGATGAAAAGAAGATATTTTTAGATATTGCATGCTTTTTCGATGGACTGAATCTGAAAGTAAAGCATATAAATTTTTTATTGAAAGACCATGATTATTCAGTGATTGCCGGATTAGAAAGGTTGAAAGATAAAGCTCTTATCAGTGTTTCTCAAGAAAATGGTGTATCGATGCACAACATTATACAAGAAACAGCTTGGCAGATTTCTCGAGAAGAATCAATTGAAGATCCTAGAAGTCAAGTTCGACTGTTGGATCCTGAGGACGTTTATCACGTACTAAACTATGATAAGGGTGACGAGGCTATCAGAAGCATAGTCATCAACTTGTCAAAAATCAAAGAACTGCAATTAAACCCTCAAGTATTTGCAAGGATGAGCAAACTACATTTTCTAGATTTTTATAGTAAAGGGTCTTGTAGTTCCCTCTGGGATCAAGGAGGCTTGTATCTTCCCCAAGGGCTTGAATCTTTATCAAATGAACTAAGATATCTTCGTTGGACCCATTATCCTTTGGAATATTTGCCTTCAAAGTTTTCTGCTGAAAATCTTGTTGAATTGAACTTGCCATATAGCAGACTGAAAAAACTTTGGCAAGAAGCACCTAGTCTAGTTAACTTATGGGTCCTTATACTTCATTCATCAACAAGACTAAAAGAGCTACCAAACTTTTCAAAGGCCACAAATCTTAGAGGGATAGATCTCCGATTTTGTGTAGGGCTGACAAGTGTGCATTCATCAGTTTTCTCTCTCAGAAATCTTGAGAAGTTGAATCTAGGTGGCTGCATTTCCCTTAGAAGCCTTCGAAGCAATGTCCATTTGGACTCCCTTCGTTATCTCTCCCTCTATGGATGCATGACACTAAAGGATTTCTCAGTGACCTCAAAGAATATGGTAAAGTTGAATTTAGAACTCACTAGTATCAAGCAACTACCTTCATCCTTTGGACTTCAAAGCAACCTCCAAAAGCTACGTTTGGCATACACTTACATTGACCACTTGCCACCAAGTATGAAGCATCTTACAAGGCTGAGACATCTAGATCTAAGACATTGCAGAAAGCTTCGAACTCTACCAGAGCTTCCCCCATCACTTGAAACACTAGATGCCCGTGGATGCGTGTCACTTGAGACTGTAATGTTCCCTTCTACTGCTTGTGAACAACTGATGGAAAATAAGAAAAGAGTTGCTTTCTGGAACTGCTTGAAATTGGATGAACAATCTCTCACCGCTATTGAGTTGAATGCACAAATTAACATGATGAAATTTGCACACCAACATTTTTCCCGACTTGGTGATGCTCAAAGTACCTATGTGTATCCTGGAAGTAAAGTTCCAGAATGGCTGGTGCATAAGACAACACATGATGACTACGTGATTATTGATCTCTCTTCTATTCTTTCTCATAACTCCTCACTTGGGCTACATCTTTTGCTTCATTTTACCGGAAGTGCCGAATGGGGAAAGGGTCTTGAAATTGAAGATTAG 2877 0.3775 MTYSYSSRVFDKTKRVVFVCLLLAALDNNNNSSYPVTDFAYPNDSLQIKYDVFVSFRGTDIRQDFLSHLIEAFSRMHINAFVDNKIVKGDGLSEALVHAIEGSPISLIIFSQDYASSHWCLSELVKIVECRKKNGQIVLPIFYKVDPSYVRYQKGTYEVAFAKHEIRYSLTTTQTWRSALTESATISGFHSSTFRDEAEFIKEIVKCVLMRLNQVQQVNSKGLVGVGKRVAHVESLLQSEGPDVRIIGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRLGMISLKKKLFSTLLGGEDLKIDTPNGLPQYIERRLRRMKVLIILDDVNDSDQLEILAGTYDWFGSGSRIIITTRDKQVLAKEFANIYEVEALNFDESLRLFNLNAFKQNHLESEYHELSKKVVNYAKGIPLVLKVLGHLLHGKDKETWESQLERLKKVQNRKVHDIIKLSYNDLDQDEKKIFLDIACFFDGLNLKVKHINFLLKDHDYSVIAGLERLKDKALISVSQENGVSMHNIIQETAWQISREESIEDPRSQVRLLDPEDVYHVLNYDKGDEAIRSIVINLSKIKELQLNPQVFARMSKLHFLDFYSKGSCSSLWDQGGLYLPQGLESLSNELRYLRWTHYPLEYLPSKFSAENLVELNLPYSRLKKLWQEAPSLVNLWVLILHSSTRLKELPNFSKATNLRGIDLRFCVGLTSVHSSVFSLRNLEKLNLGGCISLRSLRSNVHLDSLRYLSLYGCMTLKDFSVTSKNMVKLNLELTSIKQLPSSFGLQSNLQKLRLAYTYIDHLPPSMKHLTRLRHLDLRHCRKLRTLPELPPSLETLDARGCVSLETVMFPSTACEQLMENKKRVAFWNCLKLDEQSLTAIELNAQINMMKFAHQHFSRLGDAQSTYVYPGSKVPEWLVHKTTHDDYVIIDLSSILSHNSSLGLHLLLHFTGSAEWGKGLEIED* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1375 958 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 37 927 - -
Pvu10g1375 958 PRINTS Disease resistance protein signature 246 261 - -
Pvu10g1375 958 PRINTS Disease resistance protein signature 322 336 - -
Pvu10g1375 958 PRINTS Disease resistance protein signature 414 428 - -
Pvu10g1375 958 PRINTS Disease resistance protein signature 802 818 - -
Pvu10g1375 958 ProSiteProfiles TIR domain profile. 48 212 IPR000157 GO:0007165
Pvu10g1375 958 Pfam Leucine Rich Repeat 646 663 IPR011713 -
Pvu10g1375 958 Gene3D - 210 374 IPR027417 -
Pvu10g1375 958 Gene3D - 47 209 IPR035897 -
Pvu10g1375 958 Pfam NB-ARC domain 234 460 IPR002182 GO:0043531
Pvu10g1375 958 SUPERFAMILY "Winged helix" DNA-binding domain 450 557 IPR036390 -
Pvu10g1375 958 Pfam TIR domain 49 220 IPR000157 GO:0007165
Pvu10g1375 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 473 IPR027417 -
Pvu10g1375 958 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 189 IPR035897 -
Pvu10g1375 958 SUPERFAMILY L domain-like 570 864 - -
Pvu10g1375 958 Gene3D - 379 463 IPR042197 -
Pvu10g1375 958 Gene3D Ribonuclease Inhibitor 735 890 IPR032675 -
Pvu10g1375 958 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 927 IPR044974 GO:0006952
Pvu10g1375 958 SMART till_3 49 186 IPR000157 GO:0007165
Pvu10g1375 958 Gene3D Ribonuclease Inhibitor 560 732 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1375 Pvu-Chr10 40253540 40257818 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1375 41 848 WRKY Transcription Factor Family AT4G12020 33.983 4.30e-114 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1375 - - gmx:100802823 1488.01