Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1371 ATGTGTTTCCGAGTTTCTCATAGAATCAAATATGTTGTATTCATTTGTCTGGTGTTTGTAACATCTTCTACTTGTTCCAATCACACTACTCAAATCAAGTACGATGTATTTGTTAGCTTCAGAGGTGTAGATGTCCGTCGAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCAGAAGCAAATTGCTTTCTTCGTAGATGATAACATTCAGAAAGGGGAAGAACTATCTGAAGCACTATTAGGAGCCATTGAAGAATCATTAATTTCTTTGGTTATATTTTCAGAAAATTATGCTTCTTCAAGATGGTGTTTGTTAGAACTTGAGAAAATTTTGGAGTGCAGGAGAAAAAATGGACAAATTGTAATGCCTATTTTCTACGAAGTAGATCCTTCAGAGGTACGGCACCAAAGGAGGACTTATGGAGATGCCTTTGTTAAACATGAAAGAAACTATTCCTTCACTACTGTGCAAAGCTGGCGATCTGCTTTGATTGAATCTGCTAATCTATCAGGATTTCATTCACCAATTTTTCAAGATGATGCTGAACTTGTTAAAAAGACAGTTAAATTTGTGTGGAGGACGTTGAATCATGTTCACCAAGTTAACTCCAAAGGGCTTGTTGGAATTGGTAAACGGATTGCTCATGTTGAATCATTGCTGCAATTAGAAGCAACACATGTTCGCATGATTGGAATTTGGGGCATGGGTGGTATTGGTAAGACAACTATTGCACAAGAAGTATATAATAAACTTTGTTTTGAATATGATAGTTGTTGTTTTCTGGCTAACATAAGGGAAGATTCAGGAAGACATGGAATATTCTCATTGAAGAAAAAGCTTTTTTCAACATTATTAGGAGAAGAACATTTAAAAGTTGACATATCTAATGGGTGGCAGAAGTTAGTTGACAGAAGACTGCATCGCTTGAAGGTTCTTATTATTCTAGATGATGTCGATGACTCAGAGCAACTAGAAATCTTAGCTAGAACAACTTGGTTTGGATCTGGTAGTAGAATCATTGTGACAACTAGAGATAAACAGGTTCTTGCTAAAGAGTTTGCTAATGTATACCAAGTTGAGGCCTTAAACTTTGATGAATCTTTGCGACTTTTCAATTTAAATGCCTTTAAGCGAAAACATCTGCAAGCAGAGTACCAGGAACTGTCAGAGAAAGTGGTTGATTATGCCAAAGGCATTCCGTTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGGAAAGATAAAGAGATATGGGAAAGTCAATTAGAAGGACAAATGCACAACAAAAAGGTTTATGATATTATTAAATTGAGTTACAATGATCTTGAGGAGGATGAAAAGAGGATTTTTTTGGATATTGCATGTTTTTTTTATGGGCTGCAACTGGAGGTAAAGTACATAGATTTTTTATTGAAAGATCGTGATTATTCAGTGGTTGCGGGATTGGAAAGGTTGAAGGATAAAGCTCTTATCAGCATTTCTCAAGAAAATACTGGTAACGAGGCTATCAGAAGCATAGTCATCAACTTGCTGAGAATGAAGCAACTACATCTAAAGCCACAAGTATTTACTAAGATGAGGAAGCTCCACTTTCTAAATTTGTACACTGCAGGAACTCGTGATATTCTCTTCTGTGAACCGTGGGGCTTGTATCTTCCTCAAGGGCTTGAATCTCTGCCAAATGAGCTAAGATATCTTGGTTGGACGAATTATCCTTTGGAATATTTGCCTTCAAAGTTTTCTGCAGAAAATCTAGTAGAGTTGCATTTGCCATATAGCCGGGTGAAAAAACTATGGCAAGAAGTGCCGGATCTTGTGAATATAAAGGTCCTTATCCTGCATTCATCCTCAAACATAAAGGAGCTGCTAGACTTTTCAAAGGCCCCAAACCTTGAAGTAATAGATCTTCGATTCTGTGTAGGGTTGACCAGTGTTCATCCATCAATTTTCTCTCTCAAAAATCTTGAGAAGTTAGATTTGGATGGATGCACGTCCCTCACAAGCCTTCGAAGCAACATTCACTTGGACTCTCTTCGTTATCTCTCCCTCTACGGCTGCATGGAACTAAAGAATTTCTCAGTGACCTCAGAGAATATGATAAGGTTGAATTTAGAACGCACCAGTATCAAGCAACTCCCTTCATCTATTGGATCTCAGAGCAAGCTTGTAAAGTTAAATCTTGCATTCACTTACGTTGAGAGCTTGCCTGAAAGCATAAAAAATCTTGAAGGGTTGCGACATCTAGATCTACGATACTGTGAGAAGCTTAGGTCCCTACCAAAGCTTCCTCCATCAGTTGAAACACTAGATGTCCGTGAATGCATATCACTGGAGAGTATAACGTTCCCTCCTATTGCTGAACAATGGAAGGAAAATAAGAAAAAGGTTGTCTTTTGGAACTGCTTTAAATTGGATGAGCATTCTCTCACGGCTATTGAGAGGAATGCTGAAATCAACATGGTGAAATTTGCACACCAGCATTTGTCTACATCTGGTGATGCTCAAGGTATTTATGTGTACCCAGGAAGCCAAGTTCCAGAATGGTTGATGCATAAGGCCACACATGATGATTACATAACTATTTCTCCACATTCTTCTCACTTGGGCTACATCTTTTGCTTCATTTTACCGGAAGTGCCGAATGGGGAAAGGGTCTTGAAATTGAAGATTAGTACTGAAGGTGAAGATGAAGGTGAAGATGACAGTATGATTGTGTACTTGGATAGACCACATCATGGGATTAAGTCGGATCACGTGTATCTGATGTACAACCAAGCATGTTCTCGCTTTCTACAAAGTCGTGCCAAACATCAACGGAGGTTGAAAATTAAGTTTACAGTAACATCACTAGCACTCTCATCCGAATACATAAAGGTGCAGTTAAGAGGGTTTGGGGTGAGCACAACCAGCAATTTTCTTCAGAAACAAGAATTGGGTGATGCTGGAATTCCAAAGGAACATTAA 2967 0.3842 MCFRVSHRIKYVVFICLVFVTSSTCSNHTTQIKYDVFVSFRGVDVRRGFLSHLIEAFSQKQIAFFVDDNIQKGEELSEALLGAIEESLISLVIFSENYASSRWCLLELEKILECRRKNGQIVMPIFYEVDPSEVRHQRRTYGDAFVKHERNYSFTTVQSWRSALIESANLSGFHSPIFQDDAELVKKTVKFVWRTLNHVHQVNSKGLVGIGKRIAHVESLLQLEATHVRMIGIWGMGGIGKTTIAQEVYNKLCFEYDSCCFLANIREDSGRHGIFSLKKKLFSTLLGEEHLKVDISNGWQKLVDRRLHRLKVLIILDDVDDSEQLEILARTTWFGSGSRIIVTTRDKQVLAKEFANVYQVEALNFDESLRLFNLNAFKRKHLQAEYQELSEKVVDYAKGIPFVLKLLGHRLHGKDKEIWESQLEGQMHNKKVYDIIKLSYNDLEEDEKRIFLDIACFFYGLQLEVKYIDFLLKDRDYSVVAGLERLKDKALISISQENTGNEAIRSIVINLLRMKQLHLKPQVFTKMRKLHFLNLYTAGTRDILFCEPWGLYLPQGLESLPNELRYLGWTNYPLEYLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNIKVLILHSSSNIKELLDFSKAPNLEVIDLRFCVGLTSVHPSIFSLKNLEKLDLDGCTSLTSLRSNIHLDSLRYLSLYGCMELKNFSVTSENMIRLNLERTSIKQLPSSIGSQSKLVKLNLAFTYVESLPESIKNLEGLRHLDLRYCEKLRSLPKLPPSVETLDVRECISLESITFPPIAEQWKENKKKVVFWNCFKLDEHSLTAIERNAEINMVKFAHQHLSTSGDAQGIYVYPGSQVPEWLMHKATHDDYITISPHSSHLGYIFCFILPEVPNGERVLKLKISTEGEDEGEDDSMIVYLDRPHHGIKSDHVYLMYNQACSRFLQSRAKHQRRLKIKFTVTSLALSSEYIKVQLRGFGVSTTSNFLQKQELGDAGIPKEH* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1371 988 Gene3D - 362 444 IPR042197 -
Pvu10g1371 988 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 511 981 - -
Pvu10g1371 988 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 24 498 - -
Pvu10g1371 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 454 IPR027417 -
Pvu10g1371 988 ProSiteProfiles TIR domain profile. 32 196 IPR000157 GO:0007165
Pvu10g1371 988 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 173 IPR035897 -
Pvu10g1371 988 Pfam Leucine Rich Repeat 585 603 IPR011713 -
Pvu10g1371 988 Pfam NB-ARC domain 220 431 IPR002182 GO:0043531
Pvu10g1371 988 Gene3D - 200 359 IPR027417 -
Pvu10g1371 988 SMART till_3 33 170 IPR000157 GO:0007165
Pvu10g1371 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 498 IPR044974 GO:0006952
Pvu10g1371 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 511 981 IPR044974 GO:0006952
Pvu10g1371 988 PRINTS Disease resistance protein signature 230 245 - -
Pvu10g1371 988 PRINTS Disease resistance protein signature 306 320 - -
Pvu10g1371 988 PRINTS Disease resistance protein signature 397 411 - -
Pvu10g1371 988 PRINTS Disease resistance protein signature 651 667 - -
Pvu10g1371 988 SUPERFAMILY L domain-like 508 779 - -
Pvu10g1371 988 Pfam TIR domain 33 208 IPR000157 GO:0007165
Pvu10g1371 988 Gene3D - 28 199 IPR035897 -
Pvu10g1371 988 Gene3D Ribonuclease Inhibitor 699 835 IPR032675 -
Pvu10g1371 988 Gene3D Ribonuclease Inhibitor 480 698 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1371 Pvu-Chr10 40233437 40236916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1371 34 761 WRKY Transcription Factor Family AT4G12020 31.083 7.50e-88 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1371 - - pvu:PHAVU_010G131900g 1949.48