Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1364 ATCATTGTGACAACCAGAGATAAACAGGTTCTTGCTAGAGAGTTTGCTAATGTATACCAAGTTGAGGCCTTAAAATTTGATGAATCTATGCGACCTTTCAATTTAAATGCCTTTAAGCAAAAACATCTACAAGCAGAGTACCAGGAACTGTCAAAGAAAGTGGTTGATTATGCCAAAGGCATTCCGTTTGTTCTTAAACTTTTGGGTCACCGTCTTCGTGGGAAAGATAAAGAGATATGGGAAAGTCAATTAGAAGGACAAGTGCACAACAAAAAGGTTCATGATATTATTAAATTGAGTTACAATGATCTTGAGGAGGATGAAAAGAAGATTTTTTTGGATATTGCATGTTTTTTTTATGGGCTGCAACTGGAGGTAAAGTACATAGATTTTTTATTGAAAGATCGTGATTATTCAGTGGTTGCGGGATTGGAAAGGTTGAAGGATAAAGCTCTTATCAGCATTTCTCAAGAAAATACTGTATCAATGCATGACATTATACAAGAAACTGCTAGGCAGATTGCAGGTCAAGAATCTATTGAAGACCCCAGAAGCCAGAGGCGACTATTTGATCCTGATGGCGTTTATGAAGTACTAACACACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCATCAACTTGTTGAGAATGAAGCAACTACATTTAAAGCCACAAGTATTTACTAAGATGAGGAAGCTCCACTTTCTAAATTTGTACACTGCAGGAACTCGTGATATTCTCCTCTGTGAACCGTGGGGCTTGTATCTTCCTCAAGGACTTGAATCTCTGCCGAATGAGCTAAGATATCTTGGTTGGACGAATTATCCTTTGGAATCTTTGCCTTCAAAGTTTTCTGCAGAAAATCTAGTAGAGTTGCATTTGCCATATAGCCGGGTGAAAAAACTATGGCAAGAAGTGCCGGATCTTGTGAATTTAAAGGTCCTTATCCTGCAGTCATCCTCAAACATAAAGGAGCTGCTAGACTTTTCAAAGGCCCCAAACCTTGAAGTAATAGATCTTTGA 1026 0.384 IIVTTRDKQVLAREFANVYQVEALKFDESMRPFNLNAFKQKHLQAEYQELSKKVVDYAKGIPFVLKLLGHRLRGKDKEIWESQLEGQVHNKKVHDIIKLSYNDLEEDEKKIFLDIACFFYGLQLEVKYIDFLLKDRDYSVVAGLERLKDKALISISQENTVSMHDIIQETARQIAGQESIEDPRSQRRLFDPDGVYEVLTHNKGNEAIRSIVINLLRMKQLHLKPQVFTKMRKLHFLNLYTAGTRDILLCEPWGLYLPQGLESLPNELRYLGWTNYPLESLPSKFSAENLVELHLPYSRVKKLWQEVPDLVNLKVLILQSSSNIKELLDFSKAPNLEVIDL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1364 341 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1 341 - -
Pvu10g1364 341 Gene3D - 23 105 IPR042197 -
Pvu10g1364 341 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 341 IPR044974 GO:0006952
Pvu10g1364 341 SUPERFAMILY L domain-like 212 341 - -
Pvu10g1364 341 SUPERFAMILY "Winged helix" DNA-binding domain 91 199 IPR036390 -
Pvu10g1364 341 Pfam NB-ARC domain 1 94 IPR002182 GO:0043531
Pvu10g1364 341 Gene3D Ribonuclease Inhibitor 197 341 IPR032675 -
Pvu10g1364 341 Pfam Leucine Rich Repeat 289 307 IPR011713 -
Pvu10g1364 341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 115 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1364 Pvu-Chr10 40143467 40144694 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1364 1 341 WRKY Transcription Factor Family AT4G12020 35.143 1.37e-49 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1364 - - pvu:PHAVU_010G131200g 677.937